Genomic Feature

sd49

ID
ZDB-ALT-170119-5
Name
sd49
Synonyms
  • sd43 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Traver Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 2: 3201477 - 3201504 (GRCz11) (1) Details
Nucleotide change
CACGGCTTACTTCGGGTAGGCAGGACAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
28 bp deleted at Exon 1 - Intron 1 Splice Junction (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TAACGTGTACTTAATTAATATGAAATTAGAGAAGGCTACTTATTTTTGTGGGGATACATGTCAGAATGTTTACGATTAGCCTATATGCTAATTGCTCATGTTTACACCAAATCTATTAGCCGTCCCAATTTGGCAAACGTAAATAATTAAGCCAGACTTACTTTTAAATCCAGCTGCTCGGTCAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTGCTGTAAGTGAATGGGGAGGAGCGCAGTGCGAAATCCTCGCAGTGTATAAGAAGTGCGGTTCTCACAAGCAGGGATTTTACACAGCAACTCAGGACGAACGAAATGAGCTGCCCCAGAGCCGCTACAAAATGCTGGATGGACACCTTCTCCTGGGATGGTTATCATTTACCATTATAGTGCATCTGATCAGCCTGCCCGGACCGAG
CACGGCTTACTTCGGGTAGGCAGGACAA/- TTCTTTCTTAAGCTCTTTCCTAATGCTTTTTCTCATGTATGAATAGACAAAAACAGAGATGTGATATAATGCATCAACATCATGAACGAAAGAGCTCCTTACTGGTGTTGAGAAATACTGTTTAGTAATTGTTTGTTCACAAACAACCTGTTGCGTTTCAGAGTGATGTTCTCATTAATGTTTGCATGATGTTGCTTGCAGATTTATTAAACAGCACTAAACTATATCACATCAGATCGTCGTTTATCATTCAGTGCTGCGCTTTGAATGGCAGGTACAAGCCGGTCAGGTTGGTCCTTTTAATAGATGCTTGTAGAGGAATGAAAAACATCAGACACGAGCAAGCTCTCAACAGCTGTTAACAATAAAGCTACGAGGATCTCTAACCTGGTGGCCAAAACGTCTGTTCAGATCGCAGATAATATTTCTTCATCCAGCATAAACACTCGTTTTTTTTTTTCTTTTTTTGGCACCCCCGCTTTGCTCGCTCGCTAAGCTTA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations