Genomic Feature

sbu83

ID
ZDB-ALT-161122-17
Name
sbu83
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sirotkin Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 17: 12384993 - 12385045 (GRCz11) (1) Details
Nucleotide change
TGTTGTGTGGATTTCAGCACCGCGGAGAGCGCTCATTAAGAGGCGCGCGCGCC/-
Variant Notes
Deletion removes the entire RE1 site.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
53 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATACACTGAATCCAAAATTAGCCTCTCCAACAGCAATGAGCACTATCTTAATTAATATCACAAGATAATTCTTCAAATATATATATATTAATTAAATAACATAACTAAAATGCAATAAAACAGCAATCAATCTCTCATAAATTAACAAAGGCACGTTTTTTTCGCAATAAAATTAACATTTCCACAGTGCACGCATATGTTGTATATATTAATAATAATAATGATTATATATGTATTTTAGAAAACCATTCTTTAACTAAATATATTTGCAAATATGCCTTACAATAATCGTATATCTTATTTGACCAATCATTTTCATAATCTGTCTTTCAAGTATATCCAAAAAACAGGTCACATTCTCATTTTGCCAAAAATGCTCCAAAACTAGGACACGTCTATGAAAAATGACGCTTTGTTTTGTACCATGGAGGCTCGACTTTCACAAAAATCTGTTTTGAAAAAGTAGTTTCGCGCTTGGTCAGCCCGTTTTTTAATGTTTT
TGTTGTGTGGATTTCAGCACCGCGGAGAGCGCTCATTAAGAGGCGCGCGCGCC/- GGCACGAGCACGACCTTACGCTTTGATATCTCTGAAACTTCGACCAACAAACAAACGCAATTTACACCAAAGAAAATACTAACGAAGTAAACCTGTGGGAGTTAATTGTCTACAGCTCATGCAAAAGCTGTGCAAAAAAAGCAAAACACCTACCTTGCACTTGATGAACCACGTTGGGGATGTTACTATCGCCTTGCCTCCTTCAGCTCTGATTTGGGTCACCGAATGCGCGTGCACGCAGCTCTAGAGTGAGTGAGTGAGTGAGCGAGTGAAGAAAAAAAAAAAAACTCATCCCTCATCAAAGATGGCGTGCTCCCCTGACGTCATAATGACCCTCAACACTAGGGCGTGTCCATACAGTACCGGAGTGTGTAAATAACCCAGCCCTCTGTGACGTCACAATGACCCTCAACACTAGGGCGAGGCTGCTAGGGATTTGGTATTCATTAATCCCTACTATATATTATTTTCGATTGGACACTGGGTTGTTTGGTTGATTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations