Genomic Feature
sq30
- ID
- ZDB-ALT-160414-11
- Name
- sq30
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- zinc finger nuclease
- Lab of Origin
- David P. Lane Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 11: 22911900 - 22911907 (GRCz11) (1) Details
- Nucleotide change
- TCATGATG/-
- Variant Notes
-
8 base pair deletion in exon 3 of modm4 leading to a premature stop.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted in Exon 3 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
AAAAAGCACAAACAAAACAGACATTTGTCAATGAGAGCACCTACATTATGACAAAACCCATTTTACAGTCTTTAAGTCTTAGTGCCCTCTTGTGTCAATTTGAAGGCATAAAAATACTACAATTGATAATCCACACTTAGTTTTTCCATTTTAAATATCTAATGACTTAAATACAGTGAACTGTAGTATGCTATTACCACAAAACTAGGAACATACAAGCAAAATGTGTATACATTTAAACTGATGCCATACAAGAATGACAAGAGGTTATTTGTATGAGACCACATTGATAACTCTTAAATAGTAACATTAATTTTGTCCATCAGCCTAATGACTAAATTGATTTCTTTCCATTTTCTCTCCACTTAAATCTGCTTACTGGTAGCAATGAGCTTACCTGGGGTTTTTAACAGAAAAGCTCCCCACTTCCAGCAGCTCTCCCAGTGGGTCATCGTGACAGTGGACGATGTGCTGCCTCTGTTTGTCATACAGCTGCTTCA
TCATGATG/- TACTGACCCAGATAATGCATGACCTGTTCAAAAACACTGGGTTCATTAGGTGGACCTTTATCAAGCGGTTCAGCACTTATCTAGAGCTTGTGTCAATCTGCCAAGGTCAGTTTGTGTACACTTCTCACCTCCTTCAGGGTAAACACCTCCTCCTGAGCACCTGCTACTTTCAAGATCTGCAGCAGAGGCGCTCTGGGGTGGACCTGTAAAGTCATACATATTCAATATGTGGTTTACTAATGTCGGGTTCACACCAAAAGAAATATTTAAAGAAGTATTTTGAAAGTAAAATTGAAAGTGTTTGCACAACTAAGTTACCTACAAAGTCAATGCTAATGCACAAATAGATTAATTTCTGCTAAGCGATGCAAATGATGCAGAATGCGTGATATGTTTGCAGAGAGCTCAATTATGCTGGAATTCACCTCAATCTTGTCTTTCATGCAAGTTAAAAAGATTCAACTTGAGCAAAAAATTCATGCATATGATATGATGCTGGA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None