Genomic Feature

sq29

ID
ZDB-ALT-160414-10
Name
sq29
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
zinc finger nuclease 
Lab of Origin
David P. Lane Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 22911903 - 22911907 (GRCz11) (1) Details
Nucleotide change
TGATG/-
Variant Notes
5 base pair deletion in exon 3 of modm4 leading to a premature stop.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 3 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AAGCACAAACAAAACAGACATTTGTCAATGAGAGCACCTACATTATGACAAAACCCATTTTACAGTCTTTAAGTCTTAGTGCCCTCTTGTGTCAATTTGAAGGCATAAAAATACTACAATTGATAATCCACACTTAGTTTTTCCATTTTAAATATCTAATGACTTAAATACAGTGAACTGTAGTATGCTATTACCACAAAACTAGGAACATACAAGCAAAATGTGTATACATTTAAACTGATGCCATACAAGAATGACAAGAGGTTATTTGTATGAGACCACATTGATAACTCTTAAATAGTAACATTAATTTTGTCCATCAGCCTAATGACTAAATTGATTTCTTTCCATTTTCTCTCCACTTAAATCTGCTTACTGGTAGCAATGAGCTTACCTGGGGTTTTTAACAGAAAAGCTCCCCACTTCCAGCAGCTCTCCCAGTGGGTCATCGTGACAGTGGACGATGTGCTGCCTCTGTTTGTCATACAGCTGCTTCATCA
TGATG/- TACTGACCCAGATAATGCATGACCTGTTCAAAAACACTGGGTTCATTAGGTGGACCTTTATCAAGCGGTTCAGCACTTATCTAGAGCTTGTGTCAATCTGCCAAGGTCAGTTTGTGTACACTTCTCACCTCCTTCAGGGTAAACACCTCCTCCTGAGCACCTGCTACTTTCAAGATCTGCAGCAGAGGCGCTCTGGGGTGGACCTGTAAAGTCATACATATTCAATATGTGGTTTACTAATGTCGGGTTCACACCAAAAGAAATATTTAAAGAAGTATTTTGAAAGTAAAATTGAAAGTGTTTGCACAACTAAGTTACCTACAAAGTCAATGCTAATGCACAAATAGATTAATTTCTGCTAAGCGATGCAAATGATGCAGAATGCGTGATATGTTTGCAGAGAGCTCAATTATGCTGGAATTCACCTCAATCTTGTCTTTCATGCAAGTTAAAAAGATTCAACTTGAGCAAAAAATTCATGCATATGATATGATGCTGGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations