Genomic Feature

mh102

ID
ZDB-ALT-150311-2
Name
mh102
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Matthew Harris Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 7: 52164585 - 52164591 (GRCz11) (1) Details
Nucleotide change
TCAGATA/AAG
Variant Notes
4 bp deletion (+9, -5) at the exon 6-intron 6 boundary of katnb1 resulting in a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
3 bp inserted / 7 bp deleted at Exon 6 - Intron 6 Splice Junction (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
at position 141 (1)
Sequences
Flanking Sequence
GTATCTTCTGATCTCCTTGTGCAGCTGCTGCCGTTGTAGCTTGTGTATTCTGAGAAATTTTCTTACCTCTTGGTTTCGAGTGTGGTCCTGAAAAATGTCCGTTGAAGGTGTATCTAGCACTTCCCCTTAGCTCTACACCTTTAAGCTAAAGAGAATTGAGACACCCCTACCCCTTCATGTGAACGTGCAAAACAAGAGGGAAGGGCTAAGTTGTAGAATTGGGATTGGGCCTAAGATTAAAGCTGAATGAAATGTTATAAAATATACCAATAATATAAAATGTACTATTTAATATTGTAAAATAAACTAAATAACAAATCGTTAATCTCAATCAATAATCTCTATTTGCATGACAGTTGATTATGAACACAGACTTCATGTTTCTGACAGGCCTAGTGACTAGATATTCTGTGCTTATTTTAGATTGTGTCACCTCACATTTTTTTCAATTTCTGTATTCCTTGTTTAGTTGTGGGATGTGAGAAGGAAAGGATGTGTGT
TCAGATA/AAG TAAGGTAAGCACTAAGCTGACTTTGTGTGTGTCTGTACAGTCAGAAGCCAGGCTAATCACCCTTAACCCTCAGTTGTGTCTGAGCTCATGATTAATCTGTGGATTATTGAGAAGCTCAATGTATCTTGCTCATCTGTTTTGTGAAATGGGATGTTTTTGTGTGCAAGATTCAGCTGTTTATGCAATTTATAATCTCTAGATGTTCATTTTCTGTTTAATGGCACTTATCAAGCTGTTTTGAGTTTAATGCCTTTTAAAGCACTTTAGTTTTGAAAGTGCTTCATTTATTGGTTACACAGGCTTTATATGAATGTAAAATTATTGGATTTGTTTATGTGCCTAATACAATGTATGTTTTATTGCAGGGTCACACTCAGGCTGTGCGCTGTCTAGCATTCAGTCCTGATGGGAAATGGCTTGCTTCTGCCAGTGATGACAGTACAGTTAAGGTGAGAGCTTTACTGGTCATCTCGTTTCCAAAAAATGTCTTTCTAATTAGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations