Genomic Feature

um194

ID
ZDB-ALT-140917-7
Name
um194
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Sagerström Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 3: 23768984 - 23768988 (GRCz11) (1) Details
Nucleotide change
CCGTG/TTT
Variant Notes
Weicksel et al, 2014: Insertion/deletion (−2 bp) in exon1 of hoxb1a
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
3 bp inserted / 5 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGCACATTCGTAATTAAACTGGTGCGATTAAAATTAGAAACTAATGGCAGGTTAAAAGATGCAAGGGGATGAAGAAAAATCTCAATGCAAAAGTCTGAAGCGCTCTTTCTTTATTTCTTTTTCTCTCATTCGGAGAGCCTTTCACGCAGGGTTTGACATATTCTAGCTGTTATCAGATTGATGGGCTGGTTTGATTGAAGTGGCTTTGTCATGCAAATGTCAAGCGCGTGATGGATGGTCGCCGTGCGCTGACAAACTTCTGGAGGTCCCCTCACCATTGGCGCCGTGACGTCTCACGTGACCAGCAGCTGAGGTAAAGATGTGTTATAGGGAAGCACGAGCAAATACTCCAGAGGTAAGCATTTCCCCCCTTCCGCATGACATACTATTGCGAGCTTACAGGACAGGAGGCTTTCTCGATTTCTCAGGTTGTCCCTCCGCCATTAATTGCGTATGGACAGTTCCAGAATGAACTCTTTCTTGGAGTACACAATTTGTAA
CCGTG/TTT GGACGAACGCCTACTCGCCCAAGGCTGGATACCACCACTTGGACCAGGCGTTCCCGGGCCCTTTCCACACTGGACACGCTAGTGACAGCTATAACGCTGATGGACGACTTTACGTAGGGGGGAGCAATCAGCCACCAACAGCAGCAGCACAACATCAGCACCAGAACGGCATCTACGCGCATCACCAGCACCAAAATCAAACTGGCATGGGCCTTACCTATGGTGGAACTGGGACAACAAGTTATGGGACACAGGCCTGCGCCAACTCGGACTATGCTCAACACCAGTATTTTATCAACCCTGAGCAGGATGGGATGTATTATCACTCATCAGGTTTTTCAACATCAAATGCCAGTCCACACTATGGCTCTATGGCCGGTGCGTACTGCGGGGCACAGGGAGCCGTTCCAGCCGCACCTTATCAGCATCATGGATGCGAAGGCCAGGATCACCAGCGAGCATATTCACAAGGCACCTACGCTGACTTATCGGCCTCTCAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations