Genomic Feature

sa115

ID
ZDB-ALT-100506-15
Name
sa115
Synonyms
  • sa0115 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
adult males treated with ENU
Lab of Origin
Stemple Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 51618607 (GRCz11) (1) Details
Nucleotide change
G/-
Variant Notes
Fernandes (2013) The otpbsa115 allele carries a base-pair deletion at amino  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
at position 96 (1)
Sequences
Flanking Sequence
TTAAAGCACTGTGCAATCTACTGTGCAAGCTACTATTTTAATGAATTCTTTTAGAGCACGTCTTTTTTTCTAAAAAGCTTTTTTTGTAATATTATATTTTAGTACAGGCAACACTGCAATAGTTTTAGATGCGCGATCGGAAACATATTTGACATTGTTTTTAGAGAAAATCGCCAAGTAATTCATGCAATAAATTTCGTATGTCTTTAGAACTAAATTAATAAATAAGTGTTACGCCAAGCGATTCAGTTTGCTTTTACAAACAGGCAATAACCGTCTGGAAAGTCAGAGCTGAGCAAGTTCATTAAGTCTCACCTGAACCCGTGACTCCGTTAAACCAATCCTTAATGCAAGTTCCTCTCTCATAAAAATATCAGGATAGTGGGTTTTAGCAAAGCTCCTTTCTAGTTCGTTCAGCTGGGCTGGAGTAAAACGGGTCCTGTGGCGTTTCTGTTTCTGTTGGTTTTGCTGGCCGCCCGTCTGATTGGAGTTTTGCTGTT
G/- CTGCTTTTCTTGGTCTTTGGCGTTGACCTGCTGCATTCCATTAGGATTGGATCCACCATTACTTATTTCTTCTCCGGGGAGCAGAGTGGTCCCCTCCACAGTCTCTGTGGCAGAAGTAAGGTCGCCGGGGTGTCCAGAGTCAGTCCCCCCTAGTCTGCATTTTAAAGCTTCTCGGTGTACGAGAAGCTCGGCTGCAGCATCCTTCATCCCTGTGGACGCAGGTGTCAACAATTTAGCATTCTATCCAAATGGCTGTTTCATATTAATATCAATAATCAACGCATATTTAAAACACGCTACTTATTGATACATTTGTCGCACAAATAATCATAAACATATAGCAAATAATACCAAACATAAACACCACAAACATTAAAATTATTTTAGCAAGGGAAAAAAACAATACTTTTAGTAATTATCACGTAACATTGCATGTATAATGCACATATTAAAATATAATATAAACATAAAATTGGTTCACCAGACTGAAGACTGAATAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations