Transcript

si:ch211-216p19.6-201

ID

ZDB-TSCRIPT-160623-525

Previous Names

si:ch211-216p19.6-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

si:ch211-216p19.6 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000063460 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000063460.1|ZDB-TSCRIPT-160623-525 cdna: chromosome:VEGA67:7:23916424:23921923:-1 gene:OTTDARG00000043718.1 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay gene_symbol:si:ch211-216p19.6 description:novel zinc finger and SPRY domain containing protein
AATCATTTTGTTGTCTTCTCCCATCAGCAATGGCTGTTTG
CAGCAGTCCACAGGATGCAGAGCAGTTCCAGTGTTCAATA
TGCCAGGACATCTTCACTGACCCGACAACCATTCCATGTG
GACACAACTTTTGTATGGTATGTATCTGTCAACACTGGGA
CAGCAGTAGGAAGACAAGCTGCCCCCTTTGCAAAAAACAT
TTTAACTTGACACCAGAGAGTCTGGACATCAACAGAGAGT
TCAAGGAGATCATTGAACGACTGAAGAGGGTGGAAAGTCC
TGTTCAGCCTGGAGTGGTAGCGTGTGATGCCTGTACAAAA
ATAAAGAGAGGAGCTTTGAAGTCTTGTCTCCATTGTGAAG
GATCTTTCTGCAAAACTCATCTTGAACCTCATAACACCGT
AGCCAAACTGAAGAAGCACAGACTTATCAATCCTGTGGAG
AATCTGGGCGATTATATCTGCTCAAAGCACGAGAGACCGC
TGGAGCTGTTCTGCAGAGATGACCAGATGTGTGTGTGTCT
GTCGTGTACGATAAAAGACCACAGAACACACAACACTGTC
CCAGTAGAGGAGGAGAGCGAAGAAAGAAAGTCTCAGTTTG
GGAGAAAGCAGGCCGAGGTTCATTTGATGATCCAGAACAG
AATAAAGAAAATTGAAGAAATTAAAACCTCAGTGACGATC
AGCAAGTGCTTGGACTGTGGGGAGACTGGAGCACCGGAGG
AAACCCACAACATCACGGGGAGAACATGTAAAATGACAAC
TGTCCCAGTCAGGTCTTGAACCAACGACCTTCGTGCTGTG
ATGTGACAGTGCTAACCACTGAGCCACCGTGCTGCCCTGA
ATAAAGAAGCTCATAAAAGGTTAAAACCCCTAGAGTCAAA
GCTCAGAAAAAGAGAGAGCCGGCTATGTCGAGGTGTTTGC
TGATCTGATGCGCTCCATTAAGAGATGTCAGCGTGAGCTG
CTGGAGGTGATGGAGCAGAAGCAGAAAGCAGCAGAGAAAC
AGGCTGAAGATCTGATTAAAGAGCTGGAGCAGGAGATCAG
TGAACTGAAGAGGAGAAACTCTGAGCTGGAGGAGCTCTCA
CACACTGAAGATCACCTGCACCTCCTACAGATTTATCCAT
CACTTTGCAGGCCTTTAGACACCAAGATCTGGACTGGGAT
CAGTGACACTCATATGAAGGAGGATGCTGTGAGAAGAGCT
ATTACAAAACATCAGGGATTTCTCAGTGATGTAATGGTGA
AAATGACAGGAATTGAGCTAAAGAAGATCAAGAAGTTTAC
AGTGAATGTGACTATGGATCCTGAAACTGCTCACCCCAAA
CTCTTCTTGTCTGAGGATGACAAACAAGCTGAATTTGGAG
AAACACGTCAGCCTGTCCCAGACAATCCGTGGAGGTTTAA
TAAGTGTCCCAGTGTCCTAGGGAAGGAGGGATTCTGTTCT
GGCAAGTTTTATTTTGAGGTGCAGGTAAAAGGGAAAACGG
AGTGGGATTTAGGAGTGGCGAGAGAGTCTGTTAACAGGAA
GGGAATAATTACTCTGAGTCCCAGGAATGGACTGTGGACT
CTGTGGTTGAGGAATGGAGCTGAGTATAAGGCCTGTGACT
GTCTGTCTGTGTCTCTCTGCCTGAAAGTGAAGCCCCAGAC
GGTGGGTGTGTTTGTGGATTATGAGGAGGGTTTAGTCTCA
TTTTATGATGTAGAGTCCATGTCTCATATCTACTCGTTCA
CTGGTCAGTCTTTCACTGAGAAACTCTATCCATATTTCAG
CCCAGGCTTTAATAATGGAGATCAAAATTCAGACCCACTG
ATCATTTCACCCCCCCAGTAAAAATAACTGGACTTTAGTG
TATAATGAC

Related Transcripts

Transcripts related to si:ch211-216p19.6

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch211-216p19.6-201	Havana	1849 nt
mRNA	si:ch211-216p19.6-202 (1) Ensembl	Ensembl	1569 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-216p19.6-203 (1) Ensembl	Havana	1659 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations