Transcript

spata6l-206

ID

ZDB-TSCRIPT-141209-1190

Name

spata6l-206

Previous Names

spata6l-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

spata6l (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000062173 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062173|OTTDARG00000042993|ZDB-GENE-040426-1369 spata6l|OTTDARP00000048594 spata6l-003 LG_none CU651672.6,CU672220.8 Danio rerio protein_coding KNOWN, 931 bp
ATGGAAACGCGACGCTTTTCCTGAGCTGTCCATGTTATGG
GTGAACTTGAGAAAATAACAGTTTGTTAGCGGTAACAACG
GGACACAACATGCCTCACAAAGCGGTTAAAGTGATCGTTG
AGCTCCACCTGAGGGCGATTACCTGTCCAGGGGTTCATCT
GCCCGCTAAAGATGATGTTTACCTCAGTATGAAGCAGTGA
AAATTGAACTCATTCAGTTGATTCCTCCAGCTGGAGAAAT
ACTGGCTAGTTTTGAAGAAGATGCTAGAAGTTTTCTTTTC
CCAGAGCCCAAGCTGGTCCCGTCTTTCTCTGGAGTGGAAA
GAGAGGTGTTGATGACTCGACATCCCACTTTCCCTGGTAT
CTCTCCAAGATTAGAGTTCTCCACGAAGACAACAATCAGT
GAAATCTCCAGCGACAATGGCTTCCTAACTCTTCCTGTGA
GGAGAATGAGGAGGAAAACCTCTAGAAAGTCCCGAAAACA
GAGCAGCAGCTCATCCCTTAGACATCTCTCCTCTGCTCCA
TGCAGTCAAAGAAGAAACCACAACACAGACCAGGATCAGA
GATCTTCTGGTTATTCACCCGTCTCTGCCAGAAAGCCCAG
ATTTAGAAGTCTGTCACCACATCGATCAAAACCATTGATA
GATGCAGGAGACCTGAGAAGAAGCTATTCCAGATCTTGGG
TTAGTTGTTTATATCATGTGTCATTCACTATATAACGGGG
GCCAGCTAGTAAGTGCTGTGCAGGTAAACCTCACTCCTGT
GACCTCTAAAGGTGCTCTTGTGACAAATGTTAGAGGCTGT
GGTCTTTAGCCTCCTTGGTAGAGCAACTGACCCTCATGCG
GAAGGTCGCCGGTTCGATACCTGGTCGGATCGGTTTGGCT
GGTGTAGGACCAGCGAGGTTACATCTATACTCAAAAATAC
AAGCATAAATG

Related Transcripts

Transcripts related to spata6l

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	spata6l-206	Havana	931 nt
aberrant processed transcript	spata6l-208 (1) Ensembl	Havana	838 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	spata6l-201 (1) Ensembl	Havana	1347 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	spata6l-203 (1) Ensembl	Havana	865 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	spata6l-204 (1) Ensembl	Havana	761 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	spata6l-005 (1) Ensembl	Havana	733 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	spata6l-007 (1) Ensembl	Havana	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	spata6l-008 (1) Ensembl	Havana	772 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations