Transcript

soga3a-204

ID
ZDB-TSCRIPT-131113-4604
Name
soga3a-204
Previous Names
  • ch211-151o1.2-001
  • ottdart00000059402
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Havana
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
OTTDART00000059402 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000059402|OTTDARG00000021992|ZDB-GENE-100921-84 soga3a|OTTDARP00000046312 CH211-151O1.2-001 LG_ AL929535.7 Danio rerio protein_coding KNOWN, 6035 bp
GACGTCACCTTATGAATATTGATCAGTCTAATGGTGGTTT
TACGACGCTCTTCACTGCCGTCATTTTCTTCACGGAGCAT
GGAGATGGGAAGATGAGATGTTAAAAGCTTTATAGGATAC
AATGGATGTGGATGCACACATGAACTCATGCAGATGACAG
AATGGAGTCTGTGGAAAACATGAAGCAGCAGCAGCAGCAG
CAGCGCGCGTCCTCGCCGGGGAGATTCAAAGATTCTCCGA
CAAAAGCCGCTTCAAAAAGCGGGTGCTCGAAAGCCTCGGC
GTCGAAAACAGGCGGGAAAAGCAGCCGCAGTAACTCTCCG
GTCACCGTGCACACCGGGAAAGACAGACACGCGGGCAAAG
GTGCGGCTGCTGTCCACGCCAGTGGTGCTGAAAGCCCGAC
TCTGAGGCGCGCGGAGAAGGGCAGGAGTACCGAGCGCAGC
GGCTCATCCGAGGAGCCCTACGCCGCCGCAGAGGAGCCGC
TTCTGGGGGCAGATGTGGTGTCCGACCAGCCCAGCTCCAG
CAAACCCTCTCCGGGGAAACGCGAGAGCTCCAAGGCAGAC
GGGGGAAAACAGGCGGCCAAGAGCGCGGTTGGATGCGGGC
CGGGCTTCTGGAGGGAGGGATGCCTGCAGTCAGAGCTTAT
TCAGTTTCACATGAACAAAAGCTTGAAGAAGGACAGCGGC
ATGACGACGAAGACGCCGAGCTCGCCGGTGACGGAGCCGC
AGCGGCCGCCAGAGGACACGCGCCGCCCCGCGGAGCCGTT
ACCAGAGCCCGACCAGGAGCTGGAGGAGGAGATCGAGAGA
TTACAAGACGAGAACGATTTCCTCAAGCATGAAATAGATG
AAATGCGCGCCGAGATGGATGAGATGCGGGACACGTTCTA
CGAGGAAGACGCCTGTCAGCTGCAGGACATGCGTCGGGAG
CTGGAGAGAGCACACAAGAACTGCCGGATCCTTCAGTATC
GCCTGCGCAAGGCCGAGAGGAAGAGAATGAGATATGCAGA
AACTGGAGAAATCGACAGTGAACTGCTGAGGAGCCTGGAG
CAGGACCTGAAGGTGGCCAAGGACGTATCAGTGCGGCTGC
ATAATGAACTGGAGAACGTGGAGGACAAACGAGCGAGAAC
AGACGATGAGAATGAAAGGCTGAGGCAGCAGCTGATTGAA
GTGGAAGTGACCAAACAGGCTTTGCAAAACGAGCTGGACA
AGACCAAAGACCTTTCCCTGAAACGAAGAGGAAAAGATGT
CCAGAAATCCGAGAAGAGGACTCCACAAACCCCAACAGAG
GAGGAAAACGAAGATCTGAAATGCCAATTGGCCTTCATCA
AGGAGGAGGCTGTCTTAATGCGCAAGAAAATGGCCAAGAT
CGACAAAGAGAAGGACCGCTTGGAGCAGGAGCTCCAGAAG
TATCGCTCGTTTTATGGAGACGTAGACAGTCCTCTCCCTA
AAGGAGAAGCTGGAGGTCCTCCCACCACCCGAGAGTCCGA
GCTCAAGCTCCGTCTGCGGCTGGTGGAGGAGGAAGCCAAT
ATTTTAGGTCGCAAAATCGTTGAGCTGGAAGTGGAGAACC
GTGGGCTGAAGGCGGAGCTGGATGACCTGCGCGGGGACGA
GCTGACGGGGGGAGCCGCGGACTCGTCATCCAGAGAGCAG
AGCGAGGCTTTGTCTGAACTCCGCCAGCAGCTGCAGTTGG
TGGAGGATGAAGCTGAACTCCTGCGCCGTAATTTGGCTGA
TGTGGAAGAGCAGAATACAAAAATGACCAGCGAGCTGAAC
AAGCTCAAATACAAGGCAGGATCACACGAGGGATCCCGCT
ACAGCAGTAGTGCGGTGGACGGGGCGAAGCTTGAAGCTCT
GCAGGAGGAGCTGAAAGCCGCTAGACTCCAAATCAACGAG
CTGAGCGGGAAGGTGATGCAGCTCCAGTATGAAAACCGTG
TGCTGCTGTCCAACATGCAGCGCTACGATCTGGCTTCTCA
TTTAGGCATCCGTGGCAGCCCCAGAGACAGCGACGCGGAA
AGTGACTGTGGCCGCAGGGAAAGTGACGATGACTGCTCTC
GGCTCACGCCACATCGTAAACGTGAAGGTCCTGTTGGCGG
TGAAAGCGACTCAGAGGAAGTCCGCAACATCCGGTGCCTC
ACTCCCACCCGCTCCCTGTACACCCCAGAGGGACGTTTTT
TATCCAGAAGCTTCAAGGACCGCCAGCAGATGATTGATAT
CCGCATGGAGGCGGAAAGATTGAGCAGGACCATCGACAGA
CTCATCGCCGACACCAGCACCATCATCGCTGAGGCTCGTG
TCTACTTGAATAACGGTGAGCTGTTCGGGAGACTGGACGA
TGAGGAAGAGGGCGGTCGAATACGAGAGCATGAGCTGCTT
TACCGCATTAACGCTCAGATGAAGGCTTTCAGGAAAGAGC
TGCAGAATTTTATTGACCGACTGGAAGTCCCCAAACCAGA
GGATCGAGAATCAGAAGAGCCTCTTTCAATGTTTCAACCC
ATTATTTTGCTCATCCTCATTCTTGTCTTATTCTCATCTT
TATCGTACGCCACCATTTTCAAATTAGTTTTTCTTTTCAC
TCTCTTCTTTGTTCTTTAAACGTAATTTTTATATTATTAT
TTCGTTTAGAGTTTGGTTATTTTCTTCATTCTCTTTGTTC
TGTTCTCTTAATTTATCATATTAATTTTGGACATGTCATT
AAGGTTACACACGGTACAGGACGATATCATCATTTCAGGC
ACAGGATACAATCACTCAACCAAACAAACGCAAGGCTGAT
CTTCACTGTTTGCATTCTCACTTAATTTGGGTGGAGAGAA
CAGAAGGATGTTGTTGGAGCTGAAGTGTGTTTTAGAGGAG
GTGCAGTCGGGGGTGAAGCGGGAGGAGAGTAAACGCGGGG
AGCTGGAGCTGCAGTACACGCAGGATCGCTGCGCCTGGGA
ACTGGAGAGATCTGAGCTTAAAAGTCGCATTACTCAGCTA
GAAGCTCGGGGATGTAGTGTGGTGGTGGAGAGCGTGAGGA
GTCCAGAACTGGGGGACACGCTGAAGCGAGAGCGAGCGGA
ACAGAAGAAGCTGCTGGCAGACACACACAGCGCGGCCATG
GACCTCCGCTGCAGGCTGGAGAACAGCGAGCGAGGCTGGA
TGAAGGAGAAATCTGAGCTGCTGGAACGCTTCGAGAGCGA
GAGGAAGGAGTGGGAGAACCAGCTCATGGACATGCAGAGG
AAGATTGAGGAGTTGTACAGTGAAGTGAAGGCCCACCGTA
CTGGAATCTCTCTCAGACCAATTACTGATGGACAAATTGC
ACTAAGGCTCAGCTCATGTTCTGCCAGCACGTTATCGAGT
GCTGTAACCTATCCCTCAGACGGACAGAGCTTTGAATACT
CCGAGCCTCTTACCCAGCAAAGCAATGACAGCATCGACTC
GCAACAAAGTCAACTCAGCCGAAACGCCAGTGAATCCAGC
GAATTGTGCAACAACGATCAAATCGAAGAGCAAAGTGTGG
CTGAACAACAGGCTATAGACACTGCAGACCTGGAGGAAAT
CCTGGAAAGCTGTTTGAAAGAGAAAGTGGGGAAAAAGTCT
TGGCTCACTGGACAAGATGTCCTCCTTAACCCTTTTAGAC
GATTTCAGAGCATGGAAATATCCTGTGGAAGTGATAAAAA
GAAGAACAATACTTCCCTTAATGCGGCTCTTAATGAAATC
GCCCGTGCCAGTGAAGAACTCTGCAGCTATCAGGATGAAA
AGAGGAAGTTGGCTGATATCAAGAGAAGCAGAAGTGAGTC
AGCGTTTTTTCAGAGAGAGACAGAGCTGGTGGAGAGGGTA
AAGGACCATTTGGAAATGGAAGACACGGTTTTGTACCTGA
AAAACATGAGTGAAGATCTGAAATCCATCGATGAGCAATA
TTGGATGAACTGGGAATGTTGTAACATGCATATAAGCGAT
GATAAGCCAAAACAAGAGGACATAAGGCAAGCCCCACCCA
TTCCAATCCGTAGTACATCTTGGTATATAAGCAGCCCTTC
TGCTTCCGAATTAGAGTCGAGTGTAACAGAGCAAAGGTCA
GGAACGCATCCGGACAGAAAGTACACCAGTCCTGCGATTG
TACGAAAATTTGAAGCAATGCTTCAAGAAAATGAGGGAAA
AATTTTAACCGATTCTGGAAACACAGCATGCATTGTGCCT
ACTGATATCAACTGCTGCCAGAGCCGCTGGTCCTGTGACG
CAAGTCGATTTGGCAGCAATAAATCATCCAGGGATATACC
TGTGAAGAGATGTCTCTCCAATGCTGACATCGCAGATGCA
GATCACAGTGTAAACCAAAGCGATGCAGAAAACCTAAATG
ATCTCAAGAGCGCTTCTCATCTCACAAACATCTCATCACT
AGACTCTCCAAAAAACGAAAGACTTGAGCAAAAAACTGCA
GAGTTCAACCGGACGCTCTTCCAAGCAGGAATGGGTCTTC
GCTGCGATGAGGACATTGGTATGAACGCACGCACAGATTG
TTCTCCAAGTCTCATTTCAGAGGACACTTTTACAGACAGT
CCATTGAGCTATGTTGAAGACAATCTGGAGCTTTCAGATC
TTGTTCAACCGTGTCCAGAAGACAAGGGACGAAAGACAGA
AACAAAGGACCGGTTCTCCATGCCTTTATCTCTGCAGCAG
GAATGCGGTGAAATTAAACCTCTGCAGACTGAACGCACTA
CGCCGATTTTATCTGACAAACAATGCAAGAGTGCAAGTTC
ACCACAAATCCAAACGGAAAGAGTTCAAGAAGATAAAAAG
TCCACGTGCAGCACCAGGTCTCGGATTCTAGATGAAAATC
CATGGAAGCCTTCGACACTAGCAGCCTATCCTCGTCCAGT
GGAGTCCAGGTCCAACTACGGAGCTGTTGAGAGGATTTTA
AAAAGTTACGAGGAGAGATCCCAGCAGCCCAGTCCGGGAA
AGAAGGAAGACCTGATGGACCTCTTGGAAATGTTGGATAA
GCGACGGGAGCCCGAATCCACTCAGAGACTAACACACACA
CCGCACCACAAAGAGACACATGTAAAAGTGCAGCAGTGCA
AAGAGTCCTCAGTAACTAACAAGAAGAGCTTTTCTCGACC
TGCGTGTCCTGCAAAGAGACGTTTGCCCTCTCGCTGGGCA
AGCCGCTCATCCATCTCCTCCGCATCATCTCCGTCACCTC
CACCAACACCAACACCACCTCCACCCACAGTCTTCACCCA
GAGACAAACACTCGCCTACTCCACCTTTCACACCGAGACC
GTCATCTGAGCGGCGGATACACACGCGCTACACTGCAAAA
ACCTTTAAAGCCTGATGATTACCTGTGTAAATACCAACAG
TGACTGTCCTATTGATGCTTTATTAGTTGTTTTATATTTC
TATAACCATGAAGTCAATCTGCCTTGTCATTGTTTTTACT
GGTGTGTACATGTACATTTAATTTCTGCCAATGTGATTTA
CAAATTCACAATGTTTTGTGGTTTATAGCTGCCAGTGTCT
CTGTCTGTGCTTCACATGTTGCCTGTGCTGTGTGTATGTA
CTAGTTTTGGTGGTTTATGAGGACATAAATTTGTATAATG
TCATGGATATGACCTGCTGTAGGCATTACAATGTTGAGGG
GGTTTATGAGAACATGTCTTGTGTCCTCTTAATTCATTCA
TCATAATTAAAAACCCTTTTCACATTAATGATTTTGCCAC
CGGTTTCCTGTGAGGGTTGGGTTTAGGGATAGGGGTTGGC
TTAGGCCATATAATAAGTGTTTTTTTTTTTACTGTATAAA
ATACATTATGCCTATGGAGAGTCCTCATAAACCACCAAAA
CCAACATATGTGTGTGGACTGATGTCTGACTGAGAATATT
CACATCATTCACCTTTGTTACCAAAATGACTGACCCGAGT
TATGATAGAAACAAATGGATTCTGCACTCAATTTACATGC
TTATCTGATGTAAAACATATCATTTAGACAATGCCTTTGC
AGTCCTTTTTCTTGTTAAATATTATCACAAATGAAAATGT
ATTCAGCATTTATAAAAATAAAATATGGACACTCA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations