Transcript

si:ch73-306e8.2-204

ID

ZDB-TSCRIPT-131113-2308

Name

si:ch73-306e8.2-204

Previous Names

ch73-306e8.2-003
si:ch73-306e8.2-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

si:ch73-306e8.2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000055407 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055407|OTTDARG00000038652|ZDB-GENE-131121-409 si:ch73-306e8.2|OTTDARP00000043455 CH73-306E8.2-003 LG_none CU928227.4,CU928199.8 Danio rerio protein_coding NOVEL, 1707 bp
CAGATATCATATTGACACTGATGTACAAAAGCATGTGAGC
ACTGGTTATGGAATCTCATTATTTTAAGCTCGTTTTACCA
CCAATAAGAAAGATGCTGTAAGGATGCAATTGGGTGAAAA
ATGTGTCAGTCTCATTTCTTATTCCAACTCTACTATATAA
GGTGTTTAATAAGAGTCTGGGAAACATTTCTGGCATTTAT
ATTGATCTTCTAGTGGCTCACCATGTCTCTTCACAATATG
CTGAGAGTGATGATGTTGCTTACAGCAATATCATGCTGTA
ATGCTAAATCCATCAGAGTTAGCCACACAATTCATAGTAG
AGACATTTATGAAGTACCTGGAATTGAGTACATGTCTGAC
AGTGAACTGAGACCAAAGTCTAAGATCAACTTCATGTCTG
ACAGTGAACAACAAAGCTCTAACATCAACTTCATGTCTGA
CAGTGAACAACAAAGCTCTAACATCAACTTCATGTCTGAC
AGTGAACAGTAAGTCCTTCTAAAATGAACAGTTTACATTT
CATTAAGAGAGAAATACAGTAAGAATTAGACAGTGATGCT
TGTTTAGTAGTTAAAATTGGTTCTTATGATTGATCCTCAT
TCAAAAATGACAAAGGGCAGTTATTACTATGCAATGTATT
CTGTACATTTGCTTTTGTGTGTATGTTGTAGACAAAGCTC
TAGCATCAACTTCATGTCTGAAAGTGAACACTCTGGAAGT
GGTGATGTGTCTTCTTCTGAAAAGGAGGACGTATCTGAAA
TCAGTGATTCGGATGGAGTGTTGGAAAATAACCAAGTCAC
TGCAAACTATGACCCCAATGGATCGACTAACAATGATTAC
ATCCCTCAAGACTACGGCCAATTTTACCATGATGACAACA
ATGGTCAAAATGATTCTGATGGCTCTGGAGCTGAACCACA
AGAAGAAAACCAGTAACATCAAGAGATATCAAATAAAAGA
AAGTTCTCCAATAAAAAACAGGATGAGGCTGTTAGTGTTG
TTTGCAGCAGTGGCTTACTGTTATGCCTGCAGATGGGAAA
CATTTTCTGAAGACCACACTAACAACCCACAAAGTGATGC
TATTATATAAACCTAAATCTATGCTCATATGTTTGTTAAT
TAAAAAAAAAAAAAGTTAATTTTGTTAGTAGCTGAAAATG
ACAAATAACCTTATTATTCACTGTGTATCTTCAGTTTATA
CAGTTTGGTTTTTAATTCGTTAGACTATTTTATGGTGTTA
TGACTACTTTTACAGTGATCAATCAAATGTTTCAAGAAGG
GTTGCACAATATTGGACAAATTTTACATTGCAATATTTAT
TTCTTTGCAATATTTATATTGCAATATCAATCCAATTTCC
CCAGATGACTTAAATAGCTCTGTTTGCATAGAAATTACTT
GATTGGGATGATAGGATAATGCTTTATGCTTTAAACCATG
CTTTATAGTTTTCTGGATGGAGTAACAGTACTCAAGTACA
GTAATTGAATTTAAAATAACGCTGCATAGTCATATAAATA
AATCAATAAAATCAATCATTATTAAACTTCTTTATGCACT
ACTAACATGCTTTAAAGAATCTGAAAATGCTTAAGACTTT
CACATGCCTTAAAAACATGATAAACAATAAACTTTCACTC
TATTATGGTTCAGTTTTGCAGTGTATTCACAAATCTCATG
TGTTATGGTTTCTAAACATTTATAATC

Related Transcripts

Transcripts related to si:ch73-306e8.2

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch73-306e8.2-204	Havana	1707 nt
aberrant processed transcript	si:ch73-306e8.2-205 (1) Ensembl	Havana	666 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch73-306e8.2-201 (1) Ensembl	Havana	625 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch73-306e8.2-202 (1) Ensembl	Havana	533 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch73-306e8.2-005 (1) Ensembl	Havana	547 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations