Transcript

reep6-202

ID

ZDB-TSCRIPT-131113-1831

Name

reep6-202

Previous Names

reep6-001
reep6-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

reep6 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000050332 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000050332|OTTDARG00000035377|ZDB-GENE-040912-98 reep6|OTTDARP00000039507 CH73-238C9.2-003 LG_ FP016232.7 Danio rerio protein_coding NOVEL, 1399 bp
AATTAAACGCCATTCATGTTCTTCGTATAACGACACGAGT
TTATTTTAAGTCACCATGTTTGCCATATTTACAAAGATTA
AGGACCGCGTCGAGGCTTTTTTAAACGAGAAGAATATTGT
CACCGACTGTCTCAATAAAATTGAAGAAAAAACTGGTATC
AAGAAACGTTACTTAGCGTACGGTGCTGCAGGTGTGACTG
GAGCATTTTTATTATTAGGATACGGCGCTTCTCTGATCTG
TAATCTGATTGGCTTTGTTTATCCTGCATATTTCTCTATC
AAAGCCATAGAAAGTCCTGGTAAAGAGGATGACACGCAGT
GGCTCACGTACTGGGTAATCTACGGCTTCTTCAGCGTGGG
AGAATTCTTCTCGGATATCTTTCTTCACTGGTTTCCATTC
TACTATGTATGCAAGTGCCTGTTCCTGTTGTGGTGTATGG
CTCCGGTCTCCTGGAATGGTTCTCAGGTTCTGTATAGGCA
TGTGGTCCGTCCATTTTTCCTGAAGCACGAAGCCGCAGTA
GACGGGATGGTCAGCAATATAAGCGTGAAGGCCATGTCAG
CAGCTGAGAACGTCACGAGAGAAGTCCTTCACACTCTGGT
AAGAAACCGGACTGTTGGCCCAGCTGAGTCTGAACCCAGA
AGCCTGCCTAGTTCTGCTCATACTGAACCCACTGTTGATT
AAACAATGTACAGGCGGCCAAAGTGATCTAAGAAGACAGA
ATACAACACGACATGCAAGAGATTGGTGAAAACCTAAACA
AAACTTTGACAACAGAAGTATTATATAGTCTCATTGCAAA
GACCTCACTGAGTGAATGGTAATTCACCTTCATCTGCACT
ATTTTAGACGTAGTGTTTTGTCAAAGGTGGAGTTCTGGAG
TTCAACGGTTAATATTGAAGTGCTATGAATACTTTCTGGA
TGCACTGTATATCTGCTTATAATTAGAATATGTCAGTGTC
CTCAACACAATAGTTTGGAAGTCATTTGTTGTTCACTGCA
CATATTTCGTCCACTGGCATTTAAAGGGAAAATTCAGCCA
AAAATCTAAATTCTGTCATCATTTACTCACTCTTCAAATG
TTCAGAACCTATTTGAGTTCCTTCAAGTAGAATATATTTT
TGTAAATGCTGGTAGTTGACACCCTATGACTTCAACAGGC
TCCAGTAACCTGCATTCTTCAAAAAATATCCTTTTTGTGT
TCAACAGAAGAAAGAAACTTATAAAGGTTTAAAAAGCAGT
TGGCGGAACGATCCCTTTAAATATAACTGAATAGAAAAAC
AAGACATTCAGCAGATGATATTTTGTTTATCATGTAGCAT
TAATTTGCATGTATTGCATCTGCAGGGATTTTGTAATACT
AATATTCTAATAAAAAGTTTATTCAGTCTTTCTATTGAA

Related Transcripts

Transcripts related to reep6

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	reep6-202	Havana	1399 nt
mRNA	reep6-203 (1) Ensembl	Havana	817 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	reep6-204 (1) Ensembl	Havana	846 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations