Transcript

si:ch211-287n14.3-202

ID

ZDB-TSCRIPT-131113-1657

Previous Names

ch211-287n14.3-007
si:ch211-287n14.3-007

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

si:ch211-287n14.3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000044704 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000044704|OTTDARG00000032045|ZDB-GENE-131120-146 si:ch211-287n14.3|OTTDARP00000035373 CH211-287N14.3-007 LG_ CR388050.17 Danio rerio protein_coding NOVEL, 627 bp
GGATGCGCTAATGGACGACACGGATTACAAGGAAAGTGCC
ATCGTACATCCTCTGTGTGTCTTGAGGAGCTGGTCTTTGG
ATAATGCTGAGCAGGTCTTTCTTTCTGTGAAGTAAAAGAA
TTTAACAGACAGATTTACAAACAACTGACGAAAGAAGGGA
GACCATTCAATAGCTTTGTCCCTTTATTTATCAGGGGTTG
CCACAGCAGAAGGAACTGCCAACTTATCCAGCATATGTTT
TACACAGCGGATGCCCTTCCAGCTGCAACCCAGTACTGGG
AAACACCCATTTACACTCATACACTTGAACATGGGGAGAA
CATGCAAACTCCACACAGAAATGACCACTGGCCCAGCCGG
GGCTTGAACCAGCAACCTTCTTGCTGTGAAGCGACGGTGC
TAACCACTGTGCTGCCCTATGTGCTCTATGCGGAGGCCTC
TAGAGATCGTAACCTGTGAAGAGATGATGCCACCATAGAG
GACTTCTAAATGTATCCATAATCCTGAAACAGACCGTATC
ATGAGCAGATGCTGTGGTGGTCATGGAGAAGTGGAGAGCA
TGAGACTGATTAATGAAAGACCCCAGTGACAGATGAGTGC
CCACATTGACCCTGTGGTCCAGCCTGA

Related Transcripts

Transcripts related to si:ch211-287n14.3

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch211-287n14.3-202	Havana	627 nt
aberrant processed transcript	si:ch211-287n14.3-205 (1) Ensembl	Havana	585 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	si:ch211-287n14.3-206 (1) Ensembl	Havana	433 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	si:ch211-287n14.3-209 (1) Ensembl	Havana	538 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-287n14.3-201 (1) Ensembl	Havana	295 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-287n14.3-203 (1) Ensembl	Havana	582 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-287n14.3-204 (1) Ensembl	Havana	390 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	si:ch211-287n14.3-208 (1) Ensembl	Havana	778 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-287n14.3-008 (1) Ensembl	Havana	325 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations