Transcript

lpcat1-205

ID

ZDB-TSCRIPT-120213-337

Name

lpcat1-205

Previous Names

lpcat1-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

lpcat1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000054526 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000054526|OTTDARG00000014942|ZDB-GENE-060503-915 lpcat1|OTTDARP00000042832 lpcat1-004 LG_ BX571830.6 Danio rerio protein_coding KNOWN, 820 bp
ACGCGCATGATGCTGTGAATGAACAGGAGAAGCCGAGCAC
CGGTGGCTTAAAAATCGACTAGAAGCGCGTGTACATATTA
CTGCTCCAGCATGAGGTTCCCAAACAGAAAACTACACACG
GCGGTGAACGGAGGAGACTCGGGCGTTTCTACTCACTTTA
GAAACCCTTTCGTGCACGAGTTGCGGTTTACTACTCTTCA
GAAACTCAAGAGAACATTGAGTGGAGGCAGGTCATGATTG
ACAGTGCTGCCCACAGGCTAATATGGTCCAACACTAGATC
TGAAACAAGATAGCTGTGATGACTGTGACGCTTTTCCCTG
TTCGTCTGCTCTTTGCTGCATTCATGATGTTGTTGGCCTG
GCCCTTTGCATTCGTGGCTACTGTTGGCCGTTCTGAAAAT
GCAGTTGAGCCCCTGTCCTGGTGGAGGTGGCTGGTGGATC
TGGCCCTGAAGGCCATCATGAGGGCCATGTGGTTTTCCGG
AGGGTTTCATTGGGTCCGTGTGAAGGGTCGGCCGGCTCTG
CCCAGTGAAGCACCTATCCTCACGATGGCACCTCACTCTT
CCTACTTTGATGCCATCCCTGTCACCATGACCATGGCCTC
TATAGTGATGAAGGCAGAGAGTAAAGACATTCCAGTCTGG
GGAACTCTTATCAAATTCATTCGGCCAGTGTTTGTGTCCC
GCTCGGATCAGGACTCCCGGAGGAAGACCGTCGAGGAGAT
CAAACGTAGAGCGTCATCTAATGGCGAATGGCCTCAGATC
ATGATATTCCCGGAGGGCACATGCACCAATAGATCCTGTC
TCATCGCATTTAAGCCTGGT

Related Transcripts

Transcripts related to lpcat1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lpcat1-204 (1) Ensembl	Havana	668 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	lpcat1-205	Havana	820 nt
mRNA	lpcat1-201 (1) Ensembl	Havana	2050 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	lpcat1-202 (1) Ensembl	Havana	798 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	lpcat1-206 (1) Ensembl	Ensembl	2027 nt	Select Tool ZFIN BLAST
ncRNA	lpcat1-002 (1) Ensembl	Havana	505 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations