Transcript

ptp4a1-206

ID

ZDB-TSCRIPT-110325-561

Name

ptp4a1-206

Previous Names

ptp4a1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

ptp4a1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000049586 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000049586|OTTDARG00000034922|ZDB-GENE-041121-11 ptp4a1|OTTDARP00000038900 ptp4a1-002 LG_ BX324177.48 Danio rerio protein_coding KNOWN, 1109 bp
ACCGGAGACTCTCATCACACACACGGCAGCGCTGTATGGT
CAAACACCACAACAATTATTCTCCTGGACGGCTTCATGAT
TAAGCTACAATCTTCAATGAGTAAGCATATTCCACAGTTC
TGTGGTGTTTTGGGTCACACATTTATGGAGTTTCTGAAGG
GCAGTGGGGATTACTGCCAGGCTCAGCACGGCGTTTATGC
AGAGAAGTGAACGGCTAGCCTCGCTACCTCATCAGAAGAG
AGACTTGTGTTACAGTTTTAACGTTGGCGGGTTCAGGCTT
GGAGAGCAGGCGTCCACATCGGTCGGCGGTCCTGGATGGG
ATTTTCAAGCTCTATTGCAAAGTCAAAAATGGCTCGTATG
AATAGACCTGCCCCAGTGGAGATCACTTACAAAAACATGA
GATTCCTCATTACCCACAATCCCACTAATGCCACGCTTCA
CAAATTCATCGAGGAACTGAAGAAATATGGGGTGACAACG
GTTGTTAGAGTGTGCGAGGCCACGTATGATGCAAACCTGG
TTGTCAAGGAGGGCATTCAGGTTCTGGATTGGCCCTTTGA
TGATGGAGCTCCTCCCTCCAACCAGATTGTTGATGATTGG
CTGAATCTTCTTCGGGTTAAGTTCAGGGAGGAGCCAGGAT
GCTGCATTGCCGTGCATTGTGTGGCAGGCCTTGGAAGAGC
CCCAGTGCTGGTTGCCCTGGCCCTGATTGAGTGTGGGATG
AAGTATGAGGATGCTGTTCAATTCATTCGACAAAAGCGGC
GTGGAGCATTTAACAGCAAGCAGCTTTTCTACCTGGAAAA
ATATCGTCCCAAAATGCGTCTTCGATTCAAGGATTCCAAC
GGACATCGCACCAACTGCTGCATTCAGTAAAAGATTGCGC
ATCAGCTTTTCTCAAATGTTTAATGAGAATTTGTATCTAG
CATAAGAAATATGTTCTCTTAATTGGTAAATGTGAAACTA
AAATGAAGCTTCTTTCATAGTGTCCCATTCCCTCCTCTTC
ATTTCTGTATTTCCTGTGGAGAACCTCTGTCAGCAAGCAG
AAAGACACCGTCTGGTGGAGGAGTTCTCAATGGCATTTGG
AGAGGGTTCTTGATGTCTTTTGCAGAAAA

Related Transcripts

Transcripts related to ptp4a1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ptp4a1-205 (1) Ensembl	Havana	806 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	ptp4a1-206	Havana	1109 nt
mRNA	ptp4a1-201 (1) Ensembl	Havana	2002 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ptp4a1-202 (1) Ensembl	Havana	727 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ptp4a1-204 (1) Ensembl	Havana	135 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ptp4a1-208 (1) Ensembl	Havana	821 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ptp4a1-007 (1) Ensembl	Havana	942 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations