Transcript

cacnb2a-204

ID

ZDB-TSCRIPT-110325-2597

Name

cacnb2a-204

Previous Names

cacnb2a-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

cacnb2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000050650 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000050650|OTTDARG00000035580|ZDB-GENE-080808-7 cacnb2a|OTTDARP00000039770 cacnb2a-003 LG_ CU607104.20 Danio rerio protein_coding KNOWN, 2207 bp
TTACAGCTAAAATATTTACATTTACAGCACCATTTATCTA
GCTGTATTGTATCTATTTAACGTGTTGCATATCCTTACTG
TAAATTATACAGTAACTATACAGTAAAATACAGTTCATAT
TACAGTTAAATACTGTGTAATTAGCTAAAATTGTTAACAG
TGTATTATGTTTGGTTAGCTAGATTGTTGGCGGTTTTTTT
TGGTTGTTGCTAGAGTTTATTGAAGTTCGTGGTTGGTATG
GTGACTAGAGCAAACGCTCTAATCGGATTGGCTGATGAAG
GCCTCCTGGATACGACTGCTGAAACGAGCAACAGGAAACC
GAGTCAAGAACAACATTGGCGGTTCAGCAGACTCATACAC
CAGTCGGCCATCAGACTCGGATGTGTCTCTGGAGGAAGAT
AAAGAGACTTTACGCAGAGAAGCTGAGAGACAGGCTCAGG
CGCAACTCGACAAGGCCAAGAGTAAACCAGTGGCGTTTGC
AGTGCGCACTAATGTTGGCTACAGTGCTTCTTCTGAAGAT
GACGTCCCCGTGCCTGGAACGGGAATCTCATTTGATCCTA
AAGATTTCCTTCATGTTAAAGAAAAATTTAATAACGACTG
GTGGATCGGCCGCTTGGTGAAGGAAGGCTGCGACATCGGT
TTCATCCCAAGTCCAGTGAAGCTGGAAAGCAGTCGCCTTC
GCCAGGAGCAGCGCGCAAAACAAGGACGCTTTTACTCAAG
TAAATCAGGGGCAAACTCTTCATCCAGTTTAGGGGACATT
GTTTCAAACTCACGGAAATCAACTCCTCCCTCCTCAGCTG
TGGACATTGACGCCGCAGGTTTAGATGCAGAGGAGAGCGA
TCCTCCTCCCCATCAGCGATCTCCCAAAGCCAGCCCAAAC
ACAGTCATATCCCCTTTAGCCCGAGAGAAACGAATGCCTT
TCTTTAAGAAGCTAAGCAGTGGCAGAAGTCGACGGAGCAT
GCTCCTCCATATGATGTGGTGCCGTCGATGAGGCCGGTTG
TTCTCGTTGGACCTTCACTCAAGGGCTACGAGGTAACAGA
TATGATGCAGAAAGCGCTGTTTGACTTTCTGAAGCACCGG
TTTGAGGGGAGGATAACCATCACAAGAGTGGCAGCTGATA
TCTCTCTGGCCAAACGCTCAGTACTGAACAACCCCAGTAA
ACACGCCATCATCGAGCGCTCAAACACACGCTCCAATCTA
GCGGAGGTTCAGAGCGAGATCGAGAGGATATTTGAGCTGG
CCCGAACGCTGCAGCTGGTGGTTTTGGACGCCGACACAAT
AAACCATCCGTCACAGCTGGGGAAAACCTGTCTGGCACCC
ATCATTGTCTACATCAAGATCACCTCTCCAAAGGTTTTGC
AGAGATTAATCAAGTCCCGAGGAAAGTCTCAGGCCAAACA
TCTCAATGTACAGATGGTGGCAGCTGACAAACTGGCCCAG
TGCCCTTCAGAGCTCTTTGACATTATTCTAGATGAGAATC
AGCTGGAAGACGCCTGTGAGCACATGGCCGACTATCTGGA
GCTATACTGGAAGTCCACTCATCCTCCCAGTGGCGCTCCG
TCCACTCCACTGCTGGACAAACTGAGCGCAGTGACCGCAG
CTGCAGTGGCCTGCAAAGAGCAGCTGACCAACACACAACC
CAAGGGCACCGGCAGTGATGAGCATGCAGATCGAGCAGCG
GCCAACAGGACTAGCTTTTATGAAGACTATCATCACCATC
ATCATCCTCAACAGCAACACTACCAGACACAGAAGCAAGA
AAGCTTTGAAGAAGAAGAGGAAGAAGAAGATGATGATGAA
GAGAATACTGACCAAAGACACGACAACAGAGACCAACAAA
ACCATCACAAAAACCAGCACTCTTCATCCACACGGACCGA
ACGCCATCATCACCACCGCCACCACCACCATCATCATCAT
CACAGACACCATCATAGTCGCACCGCCAGAACACTGTCCA
AACAGGAGACACTAGAGTCCACTGAAACCCAGACACACTC
GCAACCGCAGCAGGAGGAGGAGCAGGAGTCTGTTCAACCC
AACCATCATCGTCATCACCACCATCACCATCGTCATCATC
ACCGTAATGAGAAAGAGAAGGAATACGATCACAACGAGAG
GAACAGCCGGCAAAGAGGAAAGCAGAAATCACAACGAGAA
CACCACCATCATCACGAGAGGAGAAAACATTATATAGAAC
AATGACA

Related Transcripts

Transcripts related to cacnb2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cacnb2a-203 (1) Ensembl	Havana	1929 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	cacnb2a-204	Havana	2207 nt
aberrant processed transcript	cacnb2a-207 (1) Ensembl	Havana	2432 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
aberrant processed transcript	cacnb2a-208 (1) Ensembl	Havana	2206 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-201 (1) Ensembl	Havana	1943 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-202 (1) Ensembl	Havana	1795 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-205 (1) Ensembl	Havana	1909 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cacnb2a-206 (1) Ensembl	Havana	4132 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations