Transcript

ccnd1-201

ID

ZDB-TSCRIPT-110325-2537

Name

ccnd1-201 Nomenclature History

Previous Names

ccnd1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ccnd1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000162795 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000162795.2|gene_biotype:protein_coding|ENSDARG00000101637.2 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:7:54672940:54677379:-1
AGTTCTTTAGATTGATCCTCCGCCCTGAGCAGACAGCCTC
TCGCTCTCTCACAGGCTCGCTGCTGCTGCTTTGATCTTCC
CTTAACAACAGTCACGTCATAGGGGAGTTTTGTCAAGCGG
AGAGCTGCAGCGAGACTTTTAGAGGGTTCAGCAGAGGCAG
CAAAAAGCATCCACGGGACCAGTGTCCGACTCGAGCTCCA
GCTTTCTTACTTTTCTCACTGCTAAACACTGAAGATATGG
AGCACCAGTTGTTTTGCTGCGAAGTGGATACCATAAGAAG
AGCTTACCAAGACAGCAACCTGTTGAATGACCGAGTTTTA
CAGACAATGCTTAAAGCTGAGGAAAACTATCTCCCATCAC
CAAATTATTTCAAGTGTGTTCAGAAAGAAATTGTGCCTAA
AATGAGGAAAATCGTCGCGACGTGGATGCTCGAGACGTCA
ACTTCATCGCAAGCCCTCCCTCCATGATTGCAGCAGGCAG
TGTTGCTGCAGCGGTACAAGGACTGTACCTGAAAAGCACC
GACAGTTGCCTCTCATCCCAGAACCTCACCAACTTCCTCT
CGCAAGTCATCAGAAGTGACCCTGACTGTCTGCGATCGTG
TCAGGAACAGATCGAGTCCCTGCTGGAATCGAGTCTCAGA
CAAGCTCAGCAGCACATCTCCACAGAGACCAAAAGGGTCG
AGGAGGACGTGGACCTCTCTTGCACTCCCACAGACGTCAG
AGACATTAACATTTGAAGGGATCGCTATTCATCTCGTGTG
TGATGAATCTCTTCGTCTTTGTTTCTGATGGGTATGGGCT
TTGGCCAGAGGCGTCATGGGACAAGAGGGAAAACGGGCTC
CTACCTGCACCCCACCATCTGACCAATACCTCGAAAACTT
G

OTTDART00000050350 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000050350|OTTDARG00000016625|ZDB-GENE-980526-176 ccnd1|OTTDARP00000039520 ccnd1-003 LG_ AL929586.19 Danio rerio protein_coding KNOWN, 881 bp
AGTTCTTTAGATTGATCCTCCGCCCTGAGCAGACAGCCTC
TCGCTCTCTCACAGGCTCGCTGCTGCTGCTTTGATCTTCC
CTTAACAACAGTCACGTCATAGGGGAGTTTTGTCAAGCGG
AGAGCTGCAGCGAGACTTTTAGAGGGTTCAGCAGAGGCAG
CAAAAAGCATCCACGGGACCAGTGTCCGACTCGAGCTCCA
GCTTTCTTACTTTTCTCACTGCTAAACACTGAAGATATGG
AGCACCAGTTGTTTTGCTGCGAAGTGGATACCATAAGAAG
AGCTTACCAAGACAGCAACCTGTTGAATGACCGAGTTTTA
CAGACAATGCTTAAAGCTGAGGAAAACTATCTCCCATCAC
CAAATTATTTCAAGTGTGTTCAGAAAGAAATTGTGCCTAA
AATGAGGAAAATCGTCGCGACGTGGATGCTCGAGACGTCA
ACTTCATCGCAAGCCCTCCCTCCATGATTGCAGCAGGCAG
TGTTGCTGCAGCGGTACAAGGACTGTACCTGAAAAGCACC
GACAGTTGCCTCTCATCCCAGAACCTCACCAACTTCCTCT
CGCAAGTCATCAGAAGTGACCCTGACTGTCTGCGATCGTG
TCAGGAACAGATCGAGTCCCTGCTGGAATCGAGTCTCAGA
CAAGCTCAGCAGCACATCTCCACAGAGACCAAAAGGGTCG
AGGAGGACGTGGACCTCTCTTGCACTCCCACAGACGTCAG
AGACATTAACATTTGAAGGGATCGCTATTCATCTCGTGTG
TGATGAATCTCTTCGTCTTTGTTTCTGATGGGTATGGGCT
TTGGCCAGAGGCGTCATGGGACAAGAGGGAAAACGGGCTC
CTACCTGCACCCCACCATCTGACCAATACCTCGAAAACTT
G

Related Transcripts

Transcripts related to ccnd1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ccnd1-201	Ensembl	881 nt
mRNA	ccnd1-202 (1) Ensembl	Ensembl	5,658 nt	Select Tool ZFIN BLAST
mRNA	ccnd1-203 (1) Ensembl	Ensembl	2,742 nt	Select Tool ZFIN BLAST
mRNA	ccnd1-204 (1) Ensembl	Ensembl	840 nt	Select Tool ZFIN BLAST
ncRNA	ccnd1-004 (1) Ensembl	Ensembl	673 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations