Transcript

hnrpl-004

ID

ZDB-TSCRIPT-090929-5666

Name

hnrpl-004 Nomenclature History

Previous Names

zgc:55429-004

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

hnrnpl (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142960 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000142960.2|gene_biotype:protein_coding|ENSDARG00000035324.7 transcript_biotype:retained_intron cdna chromosome:GRCz11:5:36900176:36903346:1
AACATGGCTGCTGCTGCAGGCCATTATTACGGCGACGGAG
GCAGAGCAACAAAAAGACAAAAAACAGATAGCGACGGAAT
GGACACGGAGGGTTATAATGACCCGCACAAGACCTTGCCC
TCTCTTGTAGTGCATGTGAGGGGGCTCATTGACGGCATTA
CCGAGGCTGACCTGGTTGAGGCGCTGCAGGAGTTTGGCAC
CATCAGTTACGTTGTGTTGATGCCAAAGAAACGTCAGGCT
CTGGTGGAGTTTGAGGACATGAATGGTGCCAGTAATGCAG
TGACCTACGCTAACAATAATCAGATCTACATTGCTGGCCG
GCCATCCTACATCAACTACTCTACCAGTCAGAAAATCTCT
CGGCCCACTGATTCCGATGACACACGAAGCGTCAACAATG
TGCTTCTCCTCACCATCATGAACCCCATCTACCCCATTAC
CTCGGATGTTTTGTACACCATTTGTAATAATTGTGGACCC
GTGCAAAGAATCGTGATTTTCAGGAAGAATGGAGTTCAAG
CCATGGTCGAATTTGACTCAGTCCAGAGTGCGCAGAGGGC
CAAAGCATCTCTAAATGGAGCAGATATCTACTCTGGCTGC
TGCACCCTAAAAATTGAGTATGCCAAGCCAACACGTCTCA
ATGTCTTCAAAAATGATCAGGATACTTGGGACTACACCAA
CCCCAATCTGAGCGGCCAAGGTATGTTACAGCTTATGCAC
TCTGTGCGCCGATTTTTGGGGGTATGGGTGTGTGGACACG
CCTTCTCACATGACGTCCTCGTGAAGTATGTTAAAAGTAA
ATATTTTCCCCAAGGACGTTACATCTGTGACGCTGCTTGT
AATCTTTCTCTTTGGATTGTAATGCAAATATATTTACACT
ATTCATTTTGATTCTATTGTTTGGACAC

OTTDART00000022303 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000022303|OTTDARG00000018395|ZDB-GENE-040426-710 hnrpl|no_translation DKEY-85K8.2-004 LG_ BX547938.9 Danio rerio protein_coding KNOWN, 908 bp
AACATGGCTGCTGCTGCAGGCCATTATTACGGCGACGGAG
GCAGAGCAACAAAAAGACAAAAAACAGATAGCGACGGAAT
GGACACGGAGGGTTATAATGACCCGCACAAGACCTTGCCC
TCTCTTGTAGTGCATGTGAGGGGGCTCATTGACGGCATTA
CCGAGGCTGACCTGGTTGAGGCGCTGCAGGAGTTTGGCAC
CATCAGTTACGTTGTGTTGATGCCAAAGAAACGTCAGGCT
CTGGTGGAGTTTGAGGACATGAATGGTGCCAGTAATGCAG
TGACCTACGCTAACAATAATCAGATCTACATTGCTGGCCG
GCCATCCTACATCAACTACTCTACCAGTCAGAAAATCTCT
CGGCCCACTGATTCCGATGACACACGAAGCGTCAACAATG
TGCTTCTCCTCACCATCATGAACCCCATCTACCCCATTAC
CTCGGATGTTTTGTACACCATTTGTAATAATTGTGGACCC
GTGCAAAGAATCGTGATTTTCAGGAAGAATGGAGTTCAAG
CCATGGTCGAATTTGACTCAGTCCAGAGTGCGCAGAGGGC
CAAAGCATCTCTAAATGGAGCAGATATCTACTCTGGCTGC
TGCACCCTAAAAATTGAGTATGCCAAGCCAACACGTCTCA
ATGTCTTCAAAAATGATCAGGATACTTGGGACTACACCAA
CCCCAATCTGAGCGGCCAAGGTATGTTACAGCTTATGCAC
TCTGTGCGCCGATTTTTGGGGGTATGGGTGTGTGGACACG
CCTTCTCACATGACGTCCTCGTGAAGTATGTTAAAAGTAA
ATATTTTCCCCAAGGACGTTACATCTGTGACGCTGCTTGT
AATCTTTCTCTTTGGATTGTAATGCAAATATATTTACACT
ATTCATTTTGATTCTATTGTTTGGACAC

Related Transcripts

Transcripts related to hnrnpl

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hnrnpl-201 (1) Ensembl	Ensembl	1,899 nt	Select Tool ZFIN BLAST
mRNA	hnrnpl-202 (1) Ensembl	Ensembl	825 nt	Select Tool ZFIN BLAST
mRNA	hnrnpl-207 (1) Ensembl	Ensembl	1,897 nt	Select Tool ZFIN BLAST
ncRNA	hnrpl-003 (1) Ensembl	Ensembl	780 nt	Select Tool ZFIN BLAST
ncRNA	hnrpl-004	Ensembl	908 nt
ncRNA	hnrpl-005 (1) Ensembl	Ensembl	553 nt	Select Tool ZFIN BLAST
ncRNA	hnrpl-006 (1) Ensembl	Ensembl	527 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations