Transcript

clk2a-205

ID

ZDB-TSCRIPT-090929-3585

Name

clk2a-205

Previous Names

clk2a-001
si:ch211-81a5.7-001

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

clk2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000016914 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000016914|OTTDARG00000014168|ZDB-GENE-030131-298 clk2a|OTTDARP00000014337 CH211-81A5.7-001 LG_ CR626935.6 Danio rerio protein_coding KNOWN, 2192 bp
GAAGCGTCAACACGGATTTTCTTTGGGATAAACGGACAGG
GCTGGCTGCACAAACGATGCCACACTCCAGGCGGTATCCG
TCCTCGGAGAGGGCCAGCCGCAGCAGCTACCAAGATCGAT
ATAGAGAGCGGGACAGAGACAGAGATCGAGGAAGAAAACC
TCGACATCGCCGCTCTCCAACCTATTCTTCCAGCAGTGAA
CGTGAGAGGAGAGCGAGAGGACACAGACAGGACACCGGCT
ATGCCAGATCCAGGAGCTACGACAACCGTTCTTCAGACCG
CAGGCCATACGACAGACACTACGGCGAGAGCTACCGGCGC
TTGGACCACAGCAGGGAACGGGACAGGGATCAAAACAGGG
ATCACCGGACGCCGAGCAACTACTACTCTCGCGACGCCTC
GCCCAGCTACGACTTTCGCCGGGGACGCGACCGGGACCGC
GAGGACTCATACCGGAGGAAAGGCAGCAGGCGTAAGCACA
AACGAAGGCGGCGTAGAACCAGGTCCTATAGCGCATCCTC
CTCGATGAGATTGTCAGCACTTTGGGTGAGGGCACCTTCG
GGAGGGTGATGCAATGTATTGATCATCGCAGGGGTGGAGC
ACATGTCGCTCTGAAGATCATCAAAAATGTGGAGAAGTAC
AAAGAGGCTGCCCGCCTGGAGATCAACGTACTGGAAAGAA
TCAACGAAAAGGATCCTGAGAATAATAATCTGTGTGTGCA
GATGTTTGACTGGTTTGATTACCATGGCCATATGTGCATC
AGTTTCGAACTCTTGGCTCTCAGCACTTTTGATTTCCTCA
AAGAAAACAACTACCTGCCGTACTCCATCAACCAAGTCCG
TCATATGGCCTACCAGGTCTGCCTGGCTGTCAAATTTTTA
CATGAAAACAAACTGACACACACAGATCTGAAACCAGAAA
ACATCCTGTTTGTGAACTCGGACTACACAGTCACGTATAA
TGTTGAGAAGAAACGAGATGAGCGAACTGTGAAGAACACA
GCAGTGAGAGTGGTTGATTTCGGCAGCGCTACCTTTGACC
ATGAGCACCACAGCACCATTGTTTCCACCAGACACTACAG
AGCTCCTGAAGTTATTTTAGAACTGGGTTGGAGTCAGCCG
TGTGACGTATGGAGTATTGGCTCCATCCTCTTCGAGTACT
ACCTCGGCTTCACCCTCTTCCAGACTCATGATAATCGGGA
GCATTTAGCTATGATGGAGAGAATTCTGGGCCCTGTTCCT
TCCCGGATGATTCGGAAAACTAGGAAACAGAAGTACTTTT
ATCGTGGACGCCTGGACTGGGATGAGAACTCTTCAGCAGG
AAGATACGTCAGAGAAAACTGCAAACCTTTACGGCGATAT
CTTCTGTCTGAAGCTGAGGAGCATCACCAGCTGTTCGACC
TGATCGAGGCCATGCTGGAGTACGAGCCATCGAAGCGTCT
GACTCTTGCTGCAGCTCTCAGGCATCCGTTTTTCCAGAGC
GGCATCAGCAGCAGCGAACTGAGCGCAGGTAAGAGCTGGG
AGGCAAACCGTGACATCAGCCGGTGACACTGACACTCTCG
TCTTCAACCAACGCCAAAAAAAAGGACTCGCATGCCGACA
GGATTACATGGAGCTGGACTGACGTTCGTTTTGTAGAGCA
AGAGATAATAAAGCCATGAGTTTTCTGTCATCCTTCCATA
ATGTGAGGACAGCTCCATGTCAGCAATGAAAATGTGAAGA
AGATCCCAGAAAACAGTCATGACTGATTGGACAATGGGGA
ATGGGAATGAGTTTCAGTTCTTCCAGCCAATTTGGCCAAT
TTTTGGACTTCCACAAGTGGTGTGATGGTCAAAAGCATTA
ACTTAACACTCCATTTTTGAAAATAACTGACGAAATGAGT
ATCGCTGTTACAGCTGAGGGGGATACGTTTTGCGCATTTT
TAGCGATCAGCTGAAAATCAAAAATGCGACAACGTTTGTA
TTCAGTTCACTTCAAACCAAGTAAGCGAGAGCAAGAGCGT
CCCTCAGCACACGTTTACAGTATTTATTTAGATAAATAGC
ATCTCTTTTTTTGTGTCTTTGTATGGATCCGATTGTATAA
ATATGTGTAAATATGAATAAATATATGTTGTGACTATAGA
ATAAAGGGGCTGTCTGTGTGCTTGCTGTGAATGGGTTTTC
ACAGCGGTTCTACAGGCAAAATGTTTTTACAA

Related Transcripts

Transcripts related to clk2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	clk2a-205	Havana	2192 nt
mRNA	clk2a-201 (1) Ensembl	Havana	2292 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	clk2a-202 (1) Ensembl	Havana	2336 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	clk2a-004 (1) Ensembl	Havana	597 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	clk2a-005 (1) Ensembl	Havana	835 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations