Transcript

herpud1-201

ID

ZDB-TSCRIPT-090929-3086

Name

herpud1-201

Previous Names

herpud1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

herpud1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000015390 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000015390|OTTDARG00000012988|ZDB-GENE-050913-47 herpud1|OTTDARP00000044060 herpud1-002 LG_ BX470170.5 Danio rerio protein_coding KNOWN, 2043 bp
GTGTGTTGTCCTTGTGTCTGTTTAAATCGATACGCATCCG
TTCTCACTTTAGATATTTCATGCGCGTCTTAATATAGTTT
GATTAAAAAGGAAGAATGGAAAATTCTACGGTGTTTGATA
AAGAGACGATCTCGCTGGCAAGCTGCTTCTGGACAACCTG
CTTATCAGAGATGTTTTCTCAAAGGTTCCTTCAGATACCA
AACCCACTCTTCACCTGGTGTGTGCAGTGAGACCCCAACC
TGCTTCCCAACTAGGAGCAAGACCCAAAGTGACATCGACA
CACCAGCAGAGTTCACAGCCTTCCCCGCTAACTCCTAGCC
AGTCTTCTGGACCATCTGTGACCTCTTTGCACTCCACTGA
TGGCCTAAGGCAGCGAGGTCATGCCACATTGCCTGATACT
AGTGCCAACACATCTGCGCCTGTAACAGCAGCGATGAACC
ACCCTGCCTTCCCCACATATTCTCTTTACAGTCCACAACA
GCTGCTGTGGTTGCAGCAAATGTATGCTCGCCAGTACTAC
ATGCAGTATCAAGCTGCAATGGCAGCCGCTGCCTCGGCTC
CAATGACCACCCCTGCTGCCGCTTCCTCGCTCCCTGTTGG
CCCTCATCAAGCTGCTGTACCTGCAGCTTTACCCAATCAA
GGCCCCATCAATGACCTACCAGCCAATCAGAATGCCCCAG
GACCTGCCTTCATCAACCCAGAGGGAGCCAATCAAAATCT
CCGTATGAATGCCCAGGGTGGGCCTGTGGTCGAAGATGAG
GAGGACATGAACCGAGATTGGCTGGACTGGATGTACACAG
CATCACGATTGGGTGTCTTCCTAAGCATTGTATACTTCTA
TTCCAGCATGAGCCGCTTCATCCTGGTCATGAGCAGCCTG
GTTATTATGTACCTACACACAGCAGGCTGGTTTCCTTTCA
GACAGAGGCCTCAAGCCAGGCCTCAAAATGAGCCAGCACC
CGAGGTCAATCAGAACCAGCAGAACCAAAATGAGGACCAA
CATCCAGAACCCGTGGCGCCACCTGCTGAAGTGGAGGATG
TTGGTGTTGTTGACCCCGCGATGACAGCAGTGCCTGTTCC
CCAAGTCAGAGCACCCATCCTATGGACTGCCTGGGTGTTT
TTTAAAGCCTTTTTTGCTTCTCTGATACCTGAGCCTCCAC
AGGGTATTGCAAACTGATCCAGAAGCAGTCAGACAGAAAT
GACAAAAACTGAACTATCAAGCTCTTAGGACAGGACATTA
TAAACAAAGGCTACAAATCCTAGAAGTGGTAGCACTTTCC
AGTTCTTTTGGCTGTGTGACCTATGGCTGCACATTCTAAA
CAAACAAGTGCTTGGACATGGAGTTGTAAATATCGCTGGA
CAGTTTTTGCACAGCACTTTAGATAACCGCAACGGCTGGA
ATCGATAGTGTCGGTTGCCTGACCTGATCCTCTTATGTAG
GCTTCTGTCACCAAGACTTCATTTTTTTGAAGTGCTCCTC
GATGAGTGTCCAAGGATTAAACTCATGGGATTATCTTATT
AAGGTTCTAGTATGATGGACGACGAAGGCCACATATTGAT
TTTGTTCTAAGCGCATGAAAAGATGGAAAGTGCTTGGGAA
AATGCATTTGTGGTACTTTGAAGCTAATGGCGTTTATGCA
AGTAAAGTATGCCTACATGTTCTCTTTTTTAATTGTGCTC
GACCTGTGAAATGAGTAATGTTAATATTTATGAGGGACGC
GTTCAAGTATTGTGAGTGGAATTTGCAATTCAATGAGGAG
AGTTTGTTGGTGACCTCGGGATGAGCAGAAGGTGAATGAA
CCACACTTTGAATATCGCATCTTCATGACATGATGGAACT
GCACTTTGGGACCTGCAAAAGAGGAGAACAAAATATAACT
AATAATATATATGAAAAATTCAAATGACTGATTTGTAATC
TGATATTTATCAACACTGTAGCATTGCTGTCATTTCAGAT
TATGTATAATCAAGCTTTGTTATTAACATCATGAAAGTAA
GCCTCTTTGTACCAGAAAATGAAAACAATAAACACAATTT
CCT

Related Transcripts

Transcripts related to herpud1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	herpud1-201	Havana	2043 nt
aberrant processed transcript	herpud1-202 (1) Ensembl	Havana	618 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	herpud1-203 (1) Ensembl	Havana	1243 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	herpud1-204 (1) Ensembl	Havana	2209 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	herpud1-205 (1) Ensembl	Ensembl	5657 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations