Transcript

hnrpkl-204

ID

ZDB-TSCRIPT-090929-22543

Name

hnrpkl-204

Previous Names

hnrpkl-002
ottdart00000040008

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

hnrpkl (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000040008 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000040008|OTTDARG00000029201|ZDB-GENE-040426-1923 hnrpkl|OTTDARP00000031979 hnrpkl-002 LG_ CU468920.7 Danio rerio protein_coding KNOWN, 1582 bp
AGACAGAAGGCGTAGAATTTTCGGGTGAAAATTGGTGTGA
CGGAAGGGCTGCCTGCAGAGTTACTCGTCGAGGACAGCCT
ATTCCAGTTTCACGGCTGGCTGAAGACAATGGAGACAGAA
ATTGAGCAGCAGGACGAAGATACCACTTTCAGTAACACTG
ACACTAACGGCAAGCGCCCTGCTGAGGACATGGATGAGGA
ACAGGCATTCAAACGCTCCCGCAATACAGATGAAATGGTA
GAACTCAGGGTGCTTCTCCAGAGCAAAAATGCAGGGGCTG
TGATTGGAAAGGGAGGCAAGAACATTAAAGCTTTACGCAC
AGATTATCCTGAGTGTGAGTGCAGATATAGACACCATTGG
TGAAATTCTGCTGAAGATCATCCCGACTCTGGAGGAGTAT
CAGCACTACAGCGGAACTGATTTTGACTGTGAGCTGCGTC
TGCTGATTCATCAGAGTCTGGCTGGAGGCATTATTGGGGT
CAAAGGTGCCAAAATCAAAGAACTGAGAGAGGACGGCGAC
CTATGGGTGGGTTCCCAATGAGAGGCAGAGGAGGATTTGA
TCGAATGCCTCCTGGTCGTGGCAGTCGGTCGGTCCCCCCT
TCCAGACGTGATTATGATGATATGAGCCCACGCCGTGGAC
CACCTCCACCACCACCCGGGAGAGGAGGACGTGGTGGCAG
TAGGGCCCGAAATTTGCCTCTGCCCCCACCACCGCCGCCT
AGAGGAGGTGATCGGTTTTCCCACCAGAGTTACCACAGCA
ATATGGACGACAGACCAAATGACCGAAGGGGGCGGCCTGG
AGATCGCTATGAAAGCATGAGTGGAGGTGGATATGGTGGT
AGAGGTTCTTACAGCGACATCGGTGGGCCTGTCATTACAA
CACAAGTGACCATCCCTAAAGATCTGGCTGGCTCCATCAT
TGGGAAAGGCGGACAGAGGATCAAGCAGATTCGTCATGAG
TCAGGAGCATCTATTAAAATCGATGAGCCTCTGGAGGGCT
CAGAGGACAGGATCATTACCATCACAGGTACACAGGACCA
GATTCAGAACGCCCAGTATCTACTACAGAACAGCGTGAAG
CAGTACTCTGGACGCTTCTTCTAGAGGATGGAGACTGAAG
CCAAACTGCCATACCCATTCACTTCAACTTGTTTTCAGAG
CCTACATTCCTCTGCTTCTTGGGTAGATGTGCTCCCTGCC
ATTTTCTCCTAACAATTTTTTTTTTGAAGCAACACATTTG
AAAGAAAAGTTTTTTTTTTCTGTTAAAAGCAAGTGGATCC
TCTTTTTTTCCTTTAACATTATCTTTCTGCACGCAAATGT
TTTCCATTTATTGATTGTACTGTTTGGTATATAGAGGGAG
CCCATCTGTGATGTCCACTGTTGGCCTTACCAGAGCTGCA
TGCTAAGTCTGCAACATGCAGAATGTCTTTTTTTTTTTTT
TTATTTGGCCAATGAATTTGAATTGCCCCATTATCATCTT
GACTTCATGATTAGACGTTTGGGTGAAGTGTAAATACTGT
TTTTTTTTATTTTTTATTTTTTTTATTTAAAGGAAGAACA
TCTATTTTGATTTGAAAAATGG

Related Transcripts

Transcripts related to hnrpkl

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	hnrpkl-204	Havana	1582 nt
mRNA	hnrpkl-201 (1) Ensembl	Ensembl	3324 nt	Select Tool ZFIN BLAST
mRNA	hnrpkl-203 (1) Ensembl	Havana	2288 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	hnrpkl-206 (1) Ensembl	Ensembl	3357 nt	Select Tool ZFIN BLAST
ncRNA	hnrpkl-003 (1) Ensembl	Havana	528 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	hnrpkl-004 (1) Ensembl	Havana	711 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations