Transcript

patl1-003

ID

ZDB-TSCRIPT-090929-21345

Name

patl1-003 Nomenclature History

Previous Names

zgc:158239-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

patl1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142441 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142441.2|gene_biotype:protein_coding|ENSDARG00000017423.12 transcript_biotype:retained_intron cdna chromosome:GRCz11:1:52769696:52774403:-1
ATCATACTAGATCGCATTTCTTTAAACAATCAGTCCAGGA
GATGGTGCTGATGGACAACAGGATTAGTTCATAGATGATA
AAAGCAGGTAAAACAGATTAAAACTATCGTTTCAAAGCTG
TCTAAATGGGACTGTTTACACGCATCAGCTGCCGACCTGA
AGTTCTTAGCATTTTCCTTGCACTTACACGCAAAGCATAA
TGGGTAATTTTGAGTGCTGAGAAAAAGGTCTTTAAAGAAC
ACATTTTATTCTAAATCCATTCATTAGTTTGTTCTTGGGT
TCAATGTGAGGCTGCATGATCAGCCTCAACCCTTTTGCAC
CTGGAGTTTCTGAGAAAACCATTGTGTTGCATTTAACCAT
CTGTTTCAAGCACAGCCCTATCTCCAAGGCCAATAAAATC
CCCTCCCGTTCATCCGTTGAGCACATCAAAGGAGAAAAAC
AAGCCATTTTTAAACAACGTTTCCTCCATCTTTGTGCAGA
GTGAGTGACGAGCAGTGCTTGATGATCATGTCTGTGCGTA
AAGGGAAGCGGCTGATCTCCAGGCTCCTTCCCTTCCTGCC
ACAGCCTCAGGCTGCTGCCGTTGTCATGGGGATAGCCAGA
AACCTTCCAGCTCTGGCCAAGAAAGACAAACAAGACCAGG
TGCTGTGTTGGCTGGTAGAGCCAGTGTCGGTGGTGATTCA
ATCCATGTCGAGTACCTCTCTCACAGATCTCCTCCAGGAG
CTGCAGGGCAGTGAAGGACAGCTCCCTCTCGTGCTACAGA
ATAAGTTTGGCGTGACGCTGCTCTATCTGATTCTGAGTGA
AGGAGAGCGAATGCAGAGCTCTGATCCAAACTGTCAACTC
ATGGACGACAACCGCTG

OTTDART00000041279 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000041279|OTTDARG00000029957|ZDB-GENE-070209-83 patl1|no_translation patl1-003 LG_ CU550733.7 Danio rerio protein_coding KNOWN, 857 bp
ATCATACTAGATCGCATTTCTTTAAACAATCAGTCCAGGA
GATGGTGCTGATGGACAACAGGATTAGTTCATAGATGATA
AAAGCAGGTAAAACAGATTAAAACTATCGTTTCAAAGCTG
TCTAAATGGGACTGTTTACACGCATCAGCTGCCGACCTGA
AGTTCTTAGCATTTTCCTTGCACTTACACGCAAAGCATAA
TGGGTAATTTTGAGTGCTGAGAAAAAGGTCTTTAAAGAAC
ACATTTTATTCTAAATCCATTCATTAGTTTGTTCTTGGGT
TCAATGTGAGGCTGCATGATCAGCCTCAACCCTTTTGCAC
CTGGAGTTTCTGAGAAAACCATTGTGTTGCATTTAACCAT
CTGTTTCAAGCACAGCCCTATCTCCAAGGCCAATAAAATC
CCCTCCCGTTCATCCGTTGAGCACATCAAAGGAGAAAAAC
AAGCCATTTTTAAACAACGTTTCCTCCATCTTTGTGCAGA
GTGAGTGACGAGCAGTGCTTGATGATCATGTCTGTGCGTA
AAGGGAAGCGGCTGATCTCCAGGCTCCTTCCCTTCCTGCC
ACAGCCTCAGGCTGCTGCCGTTGTCATGGGGATAGCCAGA
AACCTTCCAGCTCTGGCCAAGAAAGACAAACAAGACCAGG
TGCTGTGTTGGCTGGTAGAGCCAGTGTCGGTGGTGATTCA
ATCCATGTCGAGTACCTCTCTCACAGATCTCCTCCAGGAG
CTGCAGGGCAGTGAAGGACAGCTCCCTCTCGTGCTACAGA
ATAAGTTTGGCGTGACGCTGCTCTATCTGATTCTGAGTGA
AGGAGAGCGAATGCAGAGCTCTGATCCAAACTGTCAACTC
ATGGACGACAACCGCTG

Related Transcripts

Transcripts related to patl1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	patl1-201 (1) Ensembl	Ensembl	3,623 nt	Select Tool ZFIN BLAST
mRNA	patl1-203 (1) Ensembl	Ensembl	2,359 nt	Select Tool ZFIN BLAST
ncRNA	patl1-002 (1) Ensembl	Ensembl	198 nt	Select Tool ZFIN BLAST
ncRNA	patl1-003	Ensembl	857 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations