Transcript

smc1al-003

ID

ZDB-TSCRIPT-090929-18536

Name

smc1al-003 Nomenclature History

Previous Names

smc1a-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

smc1al (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000126382 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000126382.3|gene_biotype:protein_coding|ENSDARG00000058203.5 transcript_biotype:retained_intron cdna chromosome:GRCz11:23:12840100:12853164:1
GTTGTGTTTATGGAACAGTTAGCCCGCGCTGCAGGATTCT
GCGTCCGCTTATTTTTGGTTTTGCTACGACTGATAACTTG
AGTGTATTATAATGGTTTAGTTTAAATTTTGTTCTGCTGT
GGAGCCCGGTTATTTTAGTGAAATATTTGTTAGTGTTTGT
CTAAATTTGACGTGTCTGAGTTATTACTTTGTTCTCATTG
TTCGTGCTAGCAATAGACACTCAGGCCGTATTCAGACAGT
TCACGTTTTATTATTTGTATAATCAAAGTCCTTGAAGTAA
GTGGTTCAGCATGGGCTACTTAAAGTTGATAGAAATCGAA
AACTTTAAGTCTTACAAAGGTAGACAGATAATCGGGCCTT
TCCACAAGTTTACTGCCATTATTGGGCCGAACGGATCGGG
AAAATCCAATCTCATGGATGCTATCAGCTTTGTTCTGGCA
GAGAAGACCAGCAATTTACGTGTAAAAACGCTAAAGGATT
TGATTCATGGAGCTCCTGTGGGAAAACCTGCTGCTAACCG
AGCATTTGTGACCATGGTGTACCAGCAGGATGGAGGACAG
GAGCTTTCATTTTCCAGAATCATCATAGGTACACATTCGC
ACATTTTTAAGAAGATTGTTGTGGTTAAAAAAAAAAAACG
AATGAAATGTCATTTTAAATTAATGCAATGAGGATTTCTG
TTTCTAAAAAAAGTTGACCATTCTGTATCTTTATTTCAAT
GTCATTTTCTTGTATTTCACCCCTGG

OTTDART00000038145 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000038145|OTTDARG00000028117|ZDB-GENE-040426-57 smc1al|no_translation smc1a-003 LG_none CT025883.6,CR376802.12 Danio rerio protein_coding KNOWN, 746 bp
GTTGTGTTTATGGAACAGTTAGCCCGCGCTGCAGGATTCT
GCGTCCGCTTATTTTTGGTTTTGCTACGACTGATAACTTG
AGTGTATTATAATGGTTTAGTTTAAATTTTGTTCTGCTGT
GGAGCCCGGTTATTTTAGTGAAATATTTGTTAGTGTTTGT
CTAAATTTGACGTGTCTGAGTTATTACTTTGTTCTCATTG
TTCGTGCTAGCAATAGACACTCAGGCCGTATTCAGACAGT
TCACGTTTTATTATTTGTATAATCAAAGTCCTTGAAGTAA
GTGGTTCAGCATGGGCTACTTAAAGTTGATAGAAATCGAA
AACTTTAAGTCTTACAAAGGTAGACAGATAATCGGGCCTT
TCCACAAGTTTACTGCCATTATTGGGCCGAACGGATCGGG
AAAATCCAATCTCATGGATGCTATCAGCTTTGTTCTGGCA
GAGAAGACCAGCAATTTACGTGTAAAAACGCTAAAGGATT
TGATTCATGGAGCTCCTGTGGGAAAACCTGCTGCTAACCG
AGCATTTGTGACCATGGTGTACCAGCAGGATGGAGGACAG
GAGCTTTCATTTTCCAGAATCATCATAGGTACACATTCGC
ACATTTTTAAGAAGATTGTTGTGGTTAAAAAAAAAAAACG
AATGAAATGTCATTTTAAATTAATGCAATGAGGATTTCTG
TTTCTAAAAAAAGTTGACCATTCTGTATCTTTATTTCAAT
GTCATTTTCTTGTATTTCACCCCTGG

Related Transcripts

Transcripts related to smc1al

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	smc1al-201 (1) Ensembl	Ensembl	4,396 nt	Select Tool ZFIN BLAST
mRNA	smc1al-202 (1) Ensembl	Ensembl	1,750 nt	Select Tool ZFIN BLAST
mRNA	smc1al-204 (1) Ensembl	Ensembl	4,379 nt	Select Tool ZFIN BLAST
ncRNA	smc1al-003	Ensembl	746 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations