Transcript

macrod2-201

ID

ZDB-TSCRIPT-090929-12127

Name

macrod2-201 Nomenclature History

Previous Names

macrod2-001
zgc:65960-001

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

macrod2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173361 (1) [ Show ]

[Download]

>tpe|ENSDART00000173361.2|gene_biotype:protein_coding|ENSDARG00000032601.10 transcript_biotype:protein_coding cdna chromosome:GRCz11:13:33703784:34558921:1
ATGAGCAAAAAGAAAAAGGAGTGGAGAGCGGAGAAAGAGC
GCCTTCTCAGCCTTAGCCTAGAGGATAGACGCAAAGATTA
TCGAGGAAACTATCTGGAACTGGACAAGATCCCCACCTGG
GCAAATCATGACAGTAATACAGCTACCGAGGAAGAAGAAC
ACCAGTCTTCCTCCCTGGCTGACAAAGTGTCTCTGTACAA
AGGTGACATCACCATCCTGGAGATTGACGCCATAGTGAAT
GCTGCAAACTCTTCTCTGCTTGGTGGTGGAGGAGTGGATG
GCTGCATACACAGAGCCGCGGGTCATCTCCTGTATGAAGA
GTGCCACTCGTTAAATGGCTGTGACACAGGAAAAGCCAAG
ATTACCTGCGGCTATGACCTCCCTGCTAAATATGTGATCC
ACACTGTCGGCCCAATCGCCAGAGGAAATGTGGGCCAGTC
CCAAAGAGATGACCTTGAATCCTGCTACTATAGTTCCCTC
AAGCTGATGAAGGACAATAACTTGAGATCCGTGGCCTTTC
CATGCATATCAACAGGAATTTATGGTTTTCCCAATGAGCC
GGCTGCAGAAATTGCCCTGAAAACCGTGCAGGAGTGGATC
GAAAAGCACCAAGATGAGATCGACCGTGTCATATTCTGCG
TCTTTCTGGAGACAGATTATGAAATTTACAAGAGGAAGAT
GTCAGATTTCTTCTCCCCAGATAATGACGACCGCAAGAAA
GAAGACGATGGCAAAATGGAGCAAGGTGAAACACAGCCTA
TGGAAGGAGACGGTGGTGATGAGGAGGATGGTGATGAAGA
TGGTGATGAGGATGATGAGGAGGATGATGATAAAAAAGAT
CAAAAGGATGTTGAAATGATGAGCCAGACAGAGGAAACCC
AAGAAGATGTGCCGATGGATAGCCAGAAGCCAGCTGACAG
CTCCCAAGCCGAGACACTGGACAAGGAGAACAAAACGCCT
GAAAAGGGAGACCCAAGAGTTGAAGGGAGTCCAGCGGCCA
AGAAGAAAGATGAACAGGAGCTGAAGAAAGACAAGGGAGA
CGACCCGCTAGTCCTTGGCGAGGAGAAAGAGCAAAGCCCA
GGAAAGAAGAAGATGCAGAAAGGCCAGGCTGATGAAGAGG
GGAAACCGGTGGAAGACTCAACAAAGAGTGCTGACACTGG
GCCGGGCATCAGTCAAGAGGATCTCATGGAGGTTGAGGAA
GCTGATAAAAATGTCACCGCAACCAAGGAGAACACCAGCA
GCAGCACTAAAGATGAAGTGAATGCCCAGGACAAGAGCTC
TAAGGAGCCCGACTCCGCTCCAACTGACAGCAGACCAAAT
TCTGAAGATGGCCAAGGCAAGAAGAGCGCACAGGAATGA

OTTDART00000029747 (1) [ Show ]

[Download]

>tpe|OTTDART00000029747|OTTDARG00000022916|ZDB-GENE-040426-1490 macrod2|OTTDARP00000024272 DKEY-38K3.1-001 LG_1 none 23421 36001 23358 CABZ01113414.1,CABZ01087951.1,CABZ01087952.1,BX005372.6,CABZ01087953.1,CABZ01036130.1,CABZ01036129.1,CABZ01036128.1,BX465200.7,BX072583.7,CU466282.12,CABZ01036120.1,CABZ01036119.1,CABZ01036118.1,CABZ01036117.1,CABZ01036116.1,CABZ01036115.1,FP236854.5,CR524481.5,CR931758.6,BX908384.16 Danio rerio protein_coding KNOWN, 1621 bp
CTGGGGTTGCTTAACTCAAAACCCAGTTACCAGAAGCCCT
CACACCACGGCACCATGAGCAAAAAGAAAAAGGAGTGGAG
AGCGGAGAAAGAGCGCCTTCTCAGCCTTAGCCTAGAGGAT
AGACGCAAAGATTATCGAGGAAACTATCTGGAACTGGACA
AGATCCCCACCTGGGCAAATCATGACAGTAATACAGCTAC
CGAGGAAGAAGAACACCAGTCTTCCTCCCTGGCTGACAAA
GTGTCTCTGTACAAAGGTGACATCACCATCCTGGAGATTG
ACGCCATAGTGAATGCTGCAAACTCTTCTCTGCTTGGTGG
TGGAGGAGTGGATGGCTGCATACACAGAGCCGCGGGTCAT
CTCCTGTATGAAGAGTGCCACTCGTTAAATGGCTGTGACA
CAGGAAAAGCCAAGATTACCTGCGGCTATGACCTCCCTGC
TAAATATGTGATCCACACTGTCGGCCCAATCGCCAGAGGA
AATGTGGGCCAGTCCCAAAGAGATGACCTTGAATCCTGCT
ACTATAGTTCCCTCAAGCTGATGAAGGACAATAACTTGAG
ATCCGTGGCCTTTCCATGCATATCAACAGGAATTTATGGT
TTTCCCAATGAGCCGGCTGCAGAAATTGCCCTGAAAACCG
TGCAGGAGTGGATCGAAAAGCACCAAGATGAGATCGACCG
TGTCATATTCTGCGTCTTTCTGGAGACAGATTATGAAATT
TACAAGAGGAAGATGTCAGATTTCTTCTCCCCAGATAATG
ACGACCGCAAGAAAGAAGACGATGGCAAAATGGAGCAAGG
TGAAACACAGCCTATGGAAGGAGACGGTGGTGATGAGGAG
GATGGTGATGAAGATGGTGATGAGGATGATGAGGAGGATG
ATGATAAAAAAGATCAAAAGGATGTTGAAATGATGAGCCA
GACAGAGGAAACCCAAGAAGATGTGCCGATGGATAGCCAG
AAGCCAGCTGACAGCTCCCAAGCCGAGACACTGGACAAGG
AGAACAAAACGCCTGAAAAGGGAGACCCAAGAGTTGAAGG
GAGTCCAGCGGCCAAGAAGAAAGATGAACAGGAGCTGAAG
AAAGACAAGGGAGACGACCCGCTAGTCCTTGGCGAGGAGA
AAGAGCAAAGCCCAGGAAAGAAGAAGATGCAGAAAGGCCA
GGCTGATGAAGAGGGGAAACCGGTGGAAGACTCAACAAAG
AGTGCTGACACTGGGCCGGGCATCAGTCAAGAGGATCTCA
TGGAGGTTGAGGAAGCTGATAAAAATGTCACCGCAACCAA
GGAGAACACCAGCAGCAGCACTAAAGATGAAGTGAATGCC
CAGGACAAGAGCTCTAAGGAGCCCGACTCCGCTCCAACTG
ACAGCAGACCAAATTCTGAAGATGGCCAAGGCAAGAAGAG
CGCACAGGAATGAGACGACAATCAGCCTCACAGGAATGAG
TGCCGGCAAACTGTGTGAAGGCAAACATCACACCAATTTT
GTCCCACGCCAGGGAGTCGCCCACAAACACTGGGAAAAAA
AAAAGAGTTGACCCCCACCTCATTCACCATCTTTCCTTCT
ATTCAACCTGTATTTCCTTTCCTCTTCCTCATCCTGATAA
TAAATCAAAAAAAAATCTAAA

Segment Relationships

Relationship	Marker Type	Marker	Citations
Contained in	BAC	CH73-337O13	ZFIN Curated Data
Contained in	BAC	CH211-81C11	ZFIN Curated Data
Contained in	BAC	CH211-185M2	ZFIN Curated Data
Contained in	BAC	DKEY-38K3	ZFIN Curated Data
Contained in	BAC	DKEY-76K16	ZFIN Curated Data
Contained in	BAC	DKEY-95P19	ZFIN Curated Data
Contained in	BAC	DKEY-253L8	ZFIN Curated Data
Contained in	BAC	DKEYP-24H12	ZFIN Curated Data

1 - 8 of 8

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Protein Products

No data available

Supporting Sequences

Type	Accession #	Sequence	Length (nt/aa)	Analysis
RNA	GenBank:BC056529 (1)		1681 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Citations

Include unpublished citations

No data available