PUBLICATION
New Findings on LMO7 Transcripts, Proteins and Regulatory Regions in Human and Vertebrate Model Organisms and the Intracellular Distribution in Skeletal Muscle Cells
- Authors
- Gomes, G., do Amaral, M.J., Bagri, K.M., Vasconcellos, L.M., Almeida, M.D.S., Alvares, L.E., Mermelstein, C.
- ID
- ZDB-PUB-211214-24
- Date
- 2021
- Source
- International Journal of Molecular Sciences 22(23): (Journal)
- Registered Authors
- Mermelstein, Claudia
- Keywords
- LIM, LMO7, PDZ, bioinformatics, calponin homology, chicken, intrinsically disordered proteins, skeletal muscle, zebrafish
- MeSH Terms
-
- Alternative Splicing
- Amino Acid Sequence
- Animals
- Chickens
- Computer Simulation
- Evolution, Molecular*
- Humans
- LIM Domain Proteins/genetics
- LIM Domain Proteins/metabolism*
- Mice
- Models, Animal
- Models, Molecular*
- Muscle Fibers, Skeletal/metabolism*
- Protein Conformation
- Transcription Factors/genetics
- Transcription Factors/metabolism*
- Zebrafish
- PubMed
- 34884689 Full text @ Int. J. Mol. Sci.
Citation
Gomes, G., do Amaral, M.J., Bagri, K.M., Vasconcellos, L.M., Almeida, M.D.S., Alvares, L.E., Mermelstein, C. (2021) New Findings on LMO7 Transcripts, Proteins and Regulatory Regions in Human and Vertebrate Model Organisms and the Intracellular Distribution in Skeletal Muscle Cells. International Journal of Molecular Sciences. 22(23):.
Abstract
LMO7 is a multifunctional PDZ-LIM protein that can interact with different molecular partners and is found in several intracellular locations. The aim of this work was to shed light on LMO7 evolution, alternative transcripts, protein structure and gene regulation through multiple in silico analyses. We also explored the intracellular distribution of the LMO7 protein in chicken and zebrafish embryonic skeletal muscle cells by means of confocal fluorescence microscopy. Our results revealed a single LMO7 gene in mammals, sauropsids, Xenopus and in the holostean fish spotted gar while two lmo7 genes (lmo7a and lmo7b) were identified in teleost fishes. In addition, several different transcripts were predicted for LMO7 in human and in major vertebrate model organisms (mouse, chicken, Xenopus and zebrafish). Bioinformatics tools revealed several structural features of the LMO7 protein including intrinsically disordered regions. We found the LMO7 protein in multiple intracellular compartments in chicken and zebrafish skeletal muscle cells, such as membrane adhesion sites and the perinuclear region. Curiously, the LMO7 protein was detected within the nuclei of muscle cells in chicken but not in zebrafish. Our data showed that a conserved regulatory element may be related to muscle-specific LMO7 expression. Our findings uncover new and important information about LMO7 and open new challenges to understanding how the diverse regulation, structure and distribution of this protein are integrated into highly complex vertebrate cellular milieux, such as skeletal muscle cells.
Genes / Markers
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Orthology
Engineered Foreign Genes
Mapping