PUBLICATION
Comparison of transcriptomic changes between zebrafish and mice upon high fat diet reveals evolutionary convergence in lipid metabolism
- Authors
- Ka, J., Pak, B., Han, O., Lee, S., Jin, S.W.
- ID
- ZDB-PUB-200810-30
- Date
- 2020
- Source
- Biochemical and Biophysical Research Communications 530(4): 638-643 (Journal)
- Registered Authors
- Keywords
- High fat diet, Homeotherm, Hyperlipidemia, Poikilotherm, RNA-Seq, Zebrafish
- MeSH Terms
-
- Animals
- Biological Evolution
- Diet, High-Fat
- Gene Ontology
- Humans
- Hyperlipidemias/genetics
- Hyperlipidemias/metabolism
- Lipid Metabolism*
- Lipids/genetics
- Mice/genetics*
- Mice/metabolism
- Transcriptome*
- Zebrafish/genetics*
- Zebrafish/metabolism
- PubMed
- 32768193 Full text @ Biochem. Biophys. Res. Commun.
Citation
Ka, J., Pak, B., Han, O., Lee, S., Jin, S.W. (2020) Comparison of transcriptomic changes between zebrafish and mice upon high fat diet reveals evolutionary convergence in lipid metabolism. Biochemical and Biophysical Research Communications. 530(4):638-643.
Abstract
Hyperlipidemia is an abnormal elevation of lipid level in blood, which affects more than 100 million people in US. Zebrafish has recently emerged as a model to study pathophysiology associated with hyperlipidemia. As a poikilotherm, the innate response toward a high fat diet regimen in zebrafish is likely to be distinct from humans, and therefore, additional caution is warranted to appropriately interpret results obtained from zebrafish model. However, to date, detailed comparative analyses on similarities and dissimilarities between zebrafish and mammals, in particular, at molecular level, have not been reported yet. Here, we identified changes in hepatic specific transcriptomic profiles of zebrafish fed with a high fat diet regimen and comparatively analyzed transcriptomic changes in zebrafish and mice. While a number of previously identified risk factors for human hyperlipidemia has been upregulated in zebrafish fed with a high fat diet regimen, zebrafish hepatic transcriptome does not share high similarity with mice. Despite these differences, KEGG pathway analyses revealed that similar signaling pathways upregulated in zebrafish and mice as a response to a high fat diet. Our data show that these two species may utilize species-specific set of genes to upregulate common signaling pathways, indicating evolutionary convergence between poikilotherm and homeotherm in regulating lipid metabolism and validating the use of zebrafish as a model for human hyperlipidemia and associated diseases.
Genes / Markers
Expression
Phenotype
Mutations / Transgenics
Human Disease / Model
Sequence Targeting Reagents
Fish
Orthology
Engineered Foreign Genes
Mapping