PUBLICATION

Data extraction, transformation, and dissemination through ZFIN

Authors
Howe, D.G., Frazer, K., Fashena, D., Ruzicka, L., Bradford, Y., Ramachandran, S., Ruef, B.J., Van Slyke, C., Singer, A., and Westerfield, M.
ID
ZDB-PUB-111212-1
Date
2011
Source
Methods in cell biology   104: 311-325 (Chapter)
Registered Authors
Bradford, Yvonne, Fashena, David, Frazer, K., Howe, Doug, Ramachandran, Sridhar, Ruef, Barbara, Ruzicka, Leyla, Singer, Amy, Van Slyke, Ceri E., Westerfield, Monte
Keywords
zebrafish, model organism, database, nomenclature, standard expression, phenotype, transgenic, community wiki, antibody, curation, danio rerio, ZFIN
MeSH Terms
  • Animals
  • Data Mining/methods*
  • Databases, Genetic/standards*
  • Information Dissemination/methods*
  • Information Management/methods
  • Information Management/standards
  • Terminology as Topic
  • Zebrafish/genetics*
PubMed
21924170 Full text @ Meth. Cell. Biol.
Abstract

The publication of a research article is the beginning of the digital life of its associated data. In this article, we will present an overview of how data are incorporated into ZFIN, with a particular emphasis on helping researchers make their work accessible to online databases.

Genes / Markers
Figures
Expression
Phenotype
Mutation and Transgenics
Human Disease / Model Data
Sequence Targeting Reagents
Fish
Antibodies
Orthology
Engineered Foreign Genes
Mapping
Errata and Notes