PUBLICATION

3-d zebrafish embryo image filtering by nonlinear partial differential equations

Authors

Rizzi, B., Campana, M., Zanella, C., Melani, C., Cunderlik, R., Kriva, Z., Bourgine, P., Mikula, K., Peyriéras, N., and Sarti, A.

ID

ZDB-PUB-071125-7

Date

2007

Source

Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference 1(1): 6251-6254 (Journal)

Registered Authors

Peyriéras, Nadine, Rizzi, Barbara

Keywords

none

MeSH Terms

Algorithms
Animals
Artificial Intelligence
Computer Simulation
Embryo, Nonmammalian/cytology*
Humans
Image Enhancement/methods
Image Interpretation, Computer-Assisted/methods*
Imaging, Three-Dimensional/methods*
Microscopy, Confocal/methods*
Models, Biological
Pattern Recognition, Automated/methods*
Reproducibility of Results
Sensitivity and Specificity
Signal Processing, Computer-Assisted*
Zebrafish/anatomy & histology*
Zebrafish/embryology*

PubMed

18003450 Full text @ Conf. Proc. IEEE Eng. Med. Biol. Soc.

Abstract

We discuss application of nonlinear PDE based methods to filtering of 3-D confocal images of embryogenesis. We focus on the mean curvature driven and the regularized Perona-Malik equations, where standard as well as newly suggested edge detectors are used. After presenting the related mathematical models, the practical results are given and discussed by visual inspection and quantitatively using the mean Hausdorff distance.

Genes / Markers

Figures

Expression

Phenotype

Mutations / Transgenics

Human Disease / Model

Sequence Targeting Reagents

Fish

Antibodies

Orthology

Engineered Foreign Genes

Mapping

Rizzi et al., 2007 ZDB-PUB-071125-7 PMID:18003450

3-d zebrafish embryo image filtering by nonlinear partial differential equations

Rizzi et al., 2007

ZDB-PUB-071125-7
PMID:18003450