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ZFIN ID:
ZDB-PERS-231226-5
Desvignes, Thomas
Email:
tdesvign@uoregon.edu
URL:
https://www.thomasdesvignes.com/
Affiliation:
Postlethwait Zebrafish Genetics Laboratory
Address:
Country:
United States
Phone:
Fax:
ORCID ID:
0000-0001-5126-8785
BIOGRAPHY AND RESEARCH INTERESTS
PUBLICATIONS
Cumplido, N., Arratia, G., Desvignes, T., Muñoz-Sánchez, S., Postlethwait, J.H., Allende, M.L. (2024)
Hox
genes control homocercal caudal fin development and evolution. Science advances. 10:eadj5991eadj5991
Parey, E., Louis, A., Montfort, J., Bouchez, O., Roques, C., Iampietro, C., Lluch, J., Castinel, A., Donnadieu, C., Desvignes, T., Floi Bucao, C., Jouanno, E., Wen, M., Mejri, S., Dirks, R., Jansen, H., Henkel, C., Chen, W.J., Zahm, M., Cabau, C., Klopp, C., Thompson, A., Robinson-Rechavi, M., Braasch, I., Lecointre, G., Bobe, J., Postlethwait, J.H., Berthelot, C., Crollius, H.R., Guiguen, Y. (2023) Genome structures resolve the early diversification of teleost fishes. Science (New York, N.Y.). 379:572575572-575
Desvignes, T., Robbins, A.E., Carey, A.Z., Bailon-Zambrano, R., Nichols, J.T., Postlethwait, J.H., Stankunas, K. (2022) Coordinated patterning of zebrafish caudal fin symmetry by a central and two peripheral organizers. Developmental Dynamics : an official publication of the American Association of Anatomists. 251(8):1306-1321
Desvignes, T., Bardou, P., Montfort, J., Sydes, J., Guyomar, C., George, S., Postlethwait, J.H., Bobe, J. (2022) FishmiRNA: An evolutionarily supported microRNA annotation and expression database for ray-finned fishes. Molecular Biology and Evolution. 39(2)
Desvignes, T., Sydes, J., Montfort, J., Bobe, J., Postlethwait, J.H. (2021) Evolution after whole genome duplication: teleost microRNAs. Molecular Biology and Evolution. 38(8):3308-3331
Yan, Y.L., Titus, T., Desvignes, T., BreMiller, R., Batzel, P., Sydes, J., Farnsworth, D., Dillon, D., Wegner, J., Phillips, J.B., Peirce, J., Dowd, J., Undiagnosed Diseases Network, Buck, C.L., Miller, A., Westerfield, M., Postlethwait, J.H. (2021) Erratum to: A fish with no sex: gonadal and adrenal functions partition between zebrafish NR5A1 co-orthologs. Genetics. 218(1)
Yan, Y.L., Titus, T., Desvignes, T., BreMiller, R., Batzel, P., Sydes, J., Farnsworth, D., Dillon, D., Wegner, J., Phillips, J.B., Peirce, J., Dowd, J., Undiagnosed Diseases Network, Buck, C.L., Miller, A., Westerfield, M., Postlethwait, J.H. (2021) A fish with no sex: gonadal and adrenal functions partition between zebrafish NR5A1 co-orthologs. Genetics. 217(2)
Yan, Y.L., Batzel, P., Titus, T., Sydes, J., Desvignes, T., Bremiller, R., Draper, B., Postlethwait, J.H. (2019) A Hormone That Lost Its Receptor: Anti-Müllerian Hormone (AMH) in Zebrafish Gonad Development and Sex Determination. Genetics. 213(2):529-553
Desvignes, T., Batzel, P., Sydes, J., Eames, B.F., Postlethwait, J.H. (2019) miRNA analysis with Prost! reveals evolutionary conservation of organ-enriched expression and post-transcriptional modifications in three-spined stickleback and zebrafish. Scientific Reports. 9:3913
Desvignes, T., Carey, A., Postlethwait, J.H. (2018) Evolution of caudal fin ray development and caudal fin hypural diastema complex in spotted gar, teleosts, and other neopterygian fishes. Developmental Dynamics : an official publication of the American Association of Anatomists. 247(6):832-853
Yan, Y.L., Desvignes, T., BreMiller, R., Wilson, C., Dillon, D., High, S., Draper, B., Buck, C.L., Postlethwait, J. (2017) The gonadal soma controls ovarian follicle proliferation through Gsdf in zebrafish. Developmental Dynamics : an official publication of the American Association of Anatomists. 246(11):925-945
Desvignes, T., Detrich, H.W., Postlethwait, J.H. (2016) Genomic conservation of erythropoietic microRNAs (erythromiRs) in white-blooded Antarctic icefish. Marine genomics. 30:27-34
Postlethwait, J.H., Yan, Y.L., Desvignes, T., Allard, C., Titus, T., Le François, N.R., Detrich, H.W. (2016) Embryogenesis and early skeletogenesis in the Antarctic Bullhead notothen, Notothenia coriiceps. Developmental Dynamics : an official publication of the American Association of Anatomists. 245(11):1066-1080
Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. (2016) The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48(4):427-37
Desvignes, T., Batzel, P., Berezikov, E., Eilbeck, K., Eppig, J.T., McAndrews, M.S., Singer, A., Postlethwait, J.H. (2015) miRNA Nomenclature: A View Incorporating Genetic Origins, Biosynthetic Pathways, and Sequence Variants. Trends in genetics : TIG. 31:613-26
Desvignes, T., Nguyen, T., Chesnel, F., Bouleau, A., Fauvel, C., Bobe, J. (2015) X-linked Retinitis Pigmentosa 2 Is a Novel Maternal-Effect Gene Required for Left-Right Asymmetry in Zebrafish. Biology of reproduction. 93(2):42
Braasch, I., Peterson, S.M., Desvignes, T., McCluskey, B.M., Batzel, P., Postlethwait, J.H. (2015) A new model army: Emerging fish models to study the genomics of vertebrate Evo-Devo. Journal of experimental zoology. Part B, Molecular and developmental evolution. 324(4):316-41
Desvignes, T., Beam, M.J., Batzel, P., Sydes, J., Postlethwait, J.H. (2014) Expanding the annotation of zebrafish microRNAs based on small RNA sequencing. Gene. 546(2):386-9
Bouleau, A., Desvignes, T., Traverso, J.M., Nguyen, T., Chesnel, F., Fauvel, C., Bobe, J. (2014) Maternally-Inherited npm2 mRNA Is Crucial for Egg Developmental Competence in Zebrafish. Biology of reproduction. 91(2):43
Desvignes, T., Contreras, A., Postlethwait, J.H. (2014) Evolution of the miR199-214 cluster and vertebrate skeletal development. RNA Biology. 11(4):281-94
Desvignes, T., Fauvel, C., and Bobe, J. (2011) The nme gene family in zebrafish oogenesis and early development. Naunyn-Schmiedeberg's archives of pharmacology. 384(4-5):439-49
Desvignes, T., Pontarotti, P., Fauvel, C., and Bobe, J. (2009) Nme protein family evolutionary history, a vertebrate perspective. BMC Evolutionary Biology. 9:256
NON-ZEBRAFISH PUBLICATIONS
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