ZFIN is now using GRCz12tu for Genomic Data
miRNA Gene
mir135b
- ID
- ZDB-MIRNAG-090929-291
- Name
- microRNA 135b
- Symbol
- mir135b Nomenclature History
- Previous Names
- Type
- miRNA_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Is expressed in brain; heart; ovary; and testis.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Desvignes et al., 2022
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
No data available
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
mir135b-201
(1)
|
Ensembl | 82 nt | ||
| miRNA | mir135b-001 (1) | 22 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Citations |
|---|---|---|---|
| Contained in | BAC | DKEY-72L14 | ZFIN Curated Data |
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- Genome Browsers
| Type | Accession # | Genome Assembly | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NR_030246 (1) | GRCz12tu | ||
| Genomic | GenBank:BX784025 (1) | 257681 nt |
No data available
- Desvignes, T., Bardou, P., Montfort, J., Sydes, J., Guyomar, C., George, S., Postlethwait, J.H., Bobe, J. (2022) FishmiRNA: An evolutionarily supported microRNA annotation and expression database for ray-finned fishes. Molecular Biology and Evolution. 39(2)
- Zhang, X., Yang, F., Liu, F., Tian, Q., Hu, M., Li, P., Zeng, Y. (2022) Conservation of Differential Animal MicroRNA Processing by Drosha and Dicer. Frontiers in molecular biosciences. 8:730006
- Ma, Y., Zang, L., Wang, D., Jiang, J., Wang, C., Wang, X., Fang, F., Wang, H. (2019) Effects of miR-181a-5p abnormal expression on zebrafish (Danio rerio) vascular development following triclosan exposure. Chemosphere. 223:523-535
- Rago, L., Castroviejo, N., Fazilaty, H., Garcia-Asencio, F., Ocaña, O.H., Galcerán, J., Nieto, M.A. (2019) MicroRNAs Establish the Right-Handed Dominance of the Heart Laterality Pathway in Vertebrates. Developmental Cell. 51:446-459.e5
- Nepal, C., Coolen, M., Hadzhiev, Y., Cussigh, D., Mydel, P., Steen, V.M., Carninci, P., Andersen, J.B., Bally-Cuif, L., Müller, F., Lenhard, B. (2016) Transcriptional, post-transcriptional and chromatin-associated regulation of pri-miRNAs, pre-miRNAs and moRNAs. Nucleic acids research. 44(7):3070-81
- Desvignes, T., Beam, M.J., Batzel, P., Sydes, J., Postlethwait, J.H. (2014) Expanding the annotation of zebrafish microRNAs based on small RNA sequencing. Gene. 546(2):386-9
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