miRNA Gene
mir199-3a
- ID
- ZDB-MIRNAG-041228-11
- Name
- microRNA 199-3a
- Symbol
- mir199-3a Nomenclature History
- Previous Names
- Type
- miRNA_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to act upstream of or within miRNA-mediated post-transcriptional gene silencing. Is expressed in head mesenchyme; nervous system; neural tube; and notochord.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Desvignes et al., 2014
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
No data available
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| antisense |
mir199-3a-001
(1)
|
Ensembl | 87 nt | ||
| miRNA | mir199-001 (1) | 23 nt | |||
| miRNA | mir199*-002 (1) | 22 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
- Zhang, X., Li, Y., Zhang, Y., Li, S. (2021) Characterization of small RNAs in early zebrafish PGCs. Acta biochimica et biophysica Sinica. 53(4):514-516
- Hsu, A.Y., Wang, D., Liu, S., Lu, J., Syahirah, R., Bennin, D.A., Huttenlocher, A., Umulis, D.M., Wan, J., Deng, Q. (2019) Phenotypical microRNA screen reveals a noncanonical role of CDK2 in regulating neutrophil migration. Proceedings of the National Academy of Sciences of the United States of America. 116(37):18561-18570
- Agarwal, S., Nagpure, N.S., Srivastava, P., Kumar, R., Pandey, M., Srivastava, S., Jena, J.K., Das, P., Kushwaha, B. (2017) In Silico Mining of Conserved miRNAs of Indian Catfish Clarias batrachus (Linnaeus, 1758) from the Contigs, ESTs, and BAC End Sequences. Applied Biochemistry and Biotechnology. 182(3):956-966
- King, B.L., Yin, V.P. (2016) A Conserved MicroRNA Regulatory Circuit Is Differentially Controlled during Limb/Appendage Regeneration. PLoS One. 11:e0157106
- Desvignes, T., Beam, M.J., Batzel, P., Sydes, J., Postlethwait, J.H. (2014) Expanding the annotation of zebrafish microRNAs based on small RNA sequencing. Gene. 546(2):386-9
- Desvignes, T., Contreras, A., Postlethwait, J.H. (2014) Evolution of the miR199-214 cluster and vertebrate skeletal development. RNA Biology. 11(4):281-94
- Alexander, M.S., Kawahara, G., Motohashi, N., Casar, J.C., Eisenberg, I., Myers, J.A., Gasperini, M.J., Estrella, E.A., Kho, A.T., Mitsuhashi, S., Shapiro, F., Kang, P.B., and Kunkel, L.M. (2013) MicroRNA-199a is induced in dystrophic muscle and affects WNT signaling, cell proliferation, and myogenic differentiation. Cell death and differentiation. 20(9):1194-208
- Lim, L.P., Glasner, M.E., Yekta, S., Burge, C.B., and Bartel, D.P. (2003) Vertebrate microRNA genes. Science (New York, N.Y.). 2999(5612):1540
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