ZFIN Lab: Beier Lab

ZFIN ID: ZDB-LAB-200206-1

ZFIN ID: ZDB-LAB-200206-1

Beier Lab

PI/Director:	Beier, David R.
Contact Person:	Beier, David R.
Email:	david.beier@seattlechildrens.org
URL:
Address:	Seattle Children's Research Institute Jack McDonald Building 1900 9th Ave Seattle WA 98101
Country:	United States
Phone:	206 884 1419
Fax:
Line Designation:	scm

GENOMIC FEATURES ORIGINATING FROM THIS LAB

Show all 2 genomic features

STATEMENT OF RESEARCH INTERESTS

The Beier lab has a long-standing interest in understanding organogenesis
and its dysregulation in human congenital defect syndromes. These studies
have primarily been done using mouse models and human patients but we have
made occasional forays in the use of zebrafish, taking advantage of the
powerful methods for genome editing, and the robustness of using geneic
analysis in large cohorts.

LAB MEMBERS

Houghtaling, Scott Fish Facility Staff

ZEBRAFISH PUBLICATIONS OF LAB MEMBERS

Geister, K.A., Lopez-Jimenez, A.J., Houghtaling, S., Ho, T.H., Vanacore, R., Beier, D.R. (2019) Loss of function of Colgalt1 disrupts collagen post-translational modification and causes musculoskeletal defects. Disease models & mechanisms. 12(6):

Manning, D.K., Sergeev, M., van Heesbeen, R.G., Wong, M.D., Oh, J.H., Liu, Y., Henkelman, R.M., Drummond, I., Shah, J.V., and Beier, D.R. (2013) Loss of the ciliary kinase nek8 causes left-right asymmetry defects. Journal of the American Society of Nephrology : JASN. 34(1):100-112

Leshchiner, I., Alexa, K., Kelsey, P., Adzhubei, I., Austin, C., Cooney, J., Anderson, H., King, M., Stottman, R., Ha, S., Drummond, I., Paw, B.H., North, T., Beier, D., Goessling, W., and Sunyaev, S. (2012) Mutation mapping and identification by whole genome sequencing. Genome research. 22(8):1541-1548

Hellman, N.E., Liu, Y., Merkel, E., Austin, C., Le Corre, S., Beier, D.R., Sun, Z., Sharma, N., Yoder, B.K., and Drummond, I.A. (2010) The zebrafish foxj1a transcription factor regulates cilia function in response to injury and epithelial stretch. Proceedings of the National Academy of Sciences of the United States of America. 107(43):18499-18504

Liu, S., Lu, W., Obara, T., Kuida, S., Lehoczky, J., Dewar, K., Drummond, I.A., and Beier, D.R. (2002) A defect in a novel Nek-family kinase causes cystic kidney disease in the mouse and in zebrafish. Development (Cambridge, England). 129(24):5839-5846

Liu, S., Obara-Ishihara, T., Drummond, I.A., and Beier, D.R. (2002) Characterization of Nek8, the gene mutated in the jck mouse model of polycystic kidney disease. Journal of the American Society of Nephrology : JASN. 13:116A

Davidson, A.J., Postlethwait, J.H., Yan, Y.-L., Beier, D.R., Van Doren, C., Förnzler, D., Celeste, A.J., Crosier, K.E., and Crosier, P.S. (1999) Isolation of zebrafish gdf7 and comparative genetic mapping of genes belonging to the growth/differentiation factor 5, 6, 7 subgroup of the TGF-beta superfamily. Genome research. 9:121-129

Förnzler, D. and Beier, D.R. (1999) Gene mapping in zebrafish using single-strand conformation ploymorphism analysis. In The Zebrafish: Genetics and Genomics, H.W. Detrich, III, M. Westerfield, and L.I. Zon, eds., San Diego, CA: Academic Press, Methods Cell Biol.. 60:185-193

Förnzler, D., Her, H., Knapik, E.W., Clark, M., Lehrach, H., Postlethwait, J.H., Zon, L.I., Beier, D.R. (1998) Gene mapping in zebrafish using single-strand conformation polymorphism analysis. Genomics. 51:216-222

Thompson, M.A., Ransom, D.G., Pratt, S.J., MacLennan, H., Kieran, M.W., Detrich,III, H.W., Vail, B., Huber, T.L., Paw, B., Brownlie, A.J., Oates, A.C., Fritz, A., Gates, MA., Amores, A., Bahary, N., Talbot, W.S., Her, H., Beier, D.R., Postlethwait, J.H., and Zon, L.I. (1998) The cloche and spadetail genes differentially affect hematopoiesis and vasculogenesis. Developmental Biology. 197:248-269

Postlethwait, J.H, Yan, Y.-L., Gates, M.A., Horne, S., Amores, A., Brownlie, A., Donovan, A., Egan, E.S., Force, A., Gong, Z., Goutel, C., Fritz, A., Kelsh, R., Knapik, E., Liao, E., Paw, B., Ransom, D., Singer, A., Thomson, M., Abduljabbar, T.S., Yelick, P., Beier, D., Joly, J.-S., Larhammar, D., Rosa, F., Westerfield, M., Zon, L.I., Johnson, S.L., and Talbot, W.S. (1998) Vertebrate genome evolution and the zebrafish gene map. Nature Genetics. 18:345-349

Beier, D.R. (1998) Zebrafish: Genomics on the fast track. Genome research. 8:9-17