ZFIN ID: ZDB-LAB-131121-1
Mukhopadhyay Lab
PI/Director: Mukhopadhyay, Debabrata
Contact Person: Angom, Ramcharan Singh
Email: Angom.Ramcharan@mayo.edu
URL: http://www.mayo.edu/research/labs/tumor-angiogenesis-vascular-biology/overview
Address: Mayo Clinic Griffin-451 Department of Biochemistry and Molecular Biology 4500 San Pablo Road Jacksonville, FL-32224
Country: United States
Phone: 904-953-0615
Fax:
Line Designation: mn


GENOMIC FEATURES ORIGINATING FROM THIS LAB
Show all 1 genomic features


STATEMENT OF RESEARCH INTERESTS


LAB MEMBERS
Angom, Ramcharan Singh Post-Doc Hoeppner, Luke Post-Doc Wang, Ying Post-Doc
Dutta, Shamit Research Staff Wang, Enfeng Research Staff


ZEBRAFISH PUBLICATIONS OF LAB MEMBERS
Angom, R.S., Mondal, S.K., Wang, F., Madamsetty, V.S., Wang, E., Dutta, S.K., Gulani, Y., Sarabia-Estrada, R., Sarkaria, J.N., Quiñones-Hinojosa, A., Mukhopadhyay, D. (2020) Ablation of neuropilin-1 improves the therapeutic response in conventional drug-resistant glioblastoma multiforme. Oncogene. 39(48):7114-7126
Yang, Yinfang, Singh, Angom Ramcharan, Zhao, Yuanyuan, Du, Tao, Huang, Yitong, Wan, Xiaohong, Mukhopadhyay, Debabrata, Wang, Ying, Wang, Nanping, Zhang, Peng (2020) TRIM28 regulates sprouting angiogenesis through VEGFR-DLL4-Notch signaling circuit. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 34(11):14710-14724
Matsuda, A., Moirangthem, A., Angom, R.S., Ishiguro, K., Driscoll, J., Yan, I.K., Mukhopadhyay, D., Patel, T. (2019) Safety of bovine milk derived extracellular vesicles used for delivery of RNA therapeutics in zebrafish and mice. Journal of applied toxicology : JAT. 40(5):706-718
Sharma, D., Sehgal, P., Mathew, S., Vellarikkal, S.K., Singh, A.R., Kapoor, S., Jayarajan, R., Scaria, V., Sivasubbu, S. (2019) A genome-wide map of circular RNAs in adult zebrafish. Scientific Reports. 9:3432
Ganaie, A., Beigh, F.H., Astone, M., Ferrari, M.G., Maqbool, R., Umbreen, S., Parray, A.S., Siddique, H.R., Hussain, T., Murugan, P., Morrissey, C., Koochekpour, S., Deng, Y., Konety, B.R., Hoeppner, L.H., Saleem, M. (2018) BMI1 Drives Metastasis of Prostate Cancer in Caucasian and African-American Men and Is A Potential Therapeutic Target: Hypothesis Tested in Race-specific Models.. Clinical cancer research : an official journal of the American Association for Cancer Research. 24(24):6421-6432
Bhoyar, R.C., Jadhao, A.G., Sivasubbu, S., Singh, A.R., Sabharwal, A., Palande, N.V., Biswas, S. (2017) Neuroanatomical demonstration of calbindin 2a- and calbindin 2b-like calcium binding proteins in the early embryonic development of zebrafish: mRNA study. International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience. 60:26-33
Astone, M., Dankert, E.N., Alam, S.K., Hoeppner, L.H. (2017) Fishing for cures: The alLURE of using zebrafish to develop precision oncology therapies. NPJ precision oncology. 1
Singh, A.R., Sivadas, A., Sabharwal, A., Vellarikal, S.K., Jayarajan, R., Verma, A., Kapoor, S., Joshi, A., Scaria, V., Sivasubbu, S. (2016) Chamber Specific Gene Expression Landscape of the Zebrafish Heart. PLoS One. 11:e0147823
Hoeppner, L.H., Sinha, S., Wang, Y., Bhattacharya, R., Dutta, S., Gong, X., Bedell, V.M., Suresh, S., Chun, C.Z., Ramchandran, R., Ekker, S.C., Mukhopadhyay, D. (2015) RhoC maintains vascular homeostasis by regulating VEGF-induced signaling in endothelial cells. Journal of Cell Science. 128(19):3556-68
Thakur, R.K., Yadav, V.K., Kumar, A., Singh, A., Pal, K., Hoeppner, L., Saha, D., Purohit, G., Basundra, R., Kar, A., Halder, R., Kumar, P., Baral, A., Kumar, M.M., Baldi, A., Vincenzi, B., Lorenzon, L., Banerjee, R., Kumar, P., Shridhar, V., Mukhopadhyay, D., Chowdhury, S. (2014) Non-metastatic 2 (NME2)-mediated suppression of lung cancer metastasis involves transcriptional regulation of key cell adhesion factor vinculin. Nucleic acids research. 42(18):11589-600
Singh, M., Bhartiya, D., Maini, J., Sharma, M., Singh, A.R., Kadarkaraisamy, S., Rana, R., Sabharwal, A., Nanda, S., Ramachandran, A., Mittal, A., Kapoor, S., Sehgal, P., Asad, Z., Kaushik, K., Vellarikkal, S.K., Jagga, D., Muthuswami, M., Chauhan, R.K., Leonard, E., Priyadarshini, R., Halimani, M., Malhotra, S., Patowary, A., Vishwakarma, H., Joshi, P., Bhardwaj, V., Bhaumik, A., Bhatt, B., Jha, A., Kumar, A., Budakoti, P., Lalwani, M.K., Meli, R., Jalali, S., Joshi, K., Pal, K., Dhiman, H., Laddha, S.V., Jadhav, V., Singh, N., Pandey, V., Sachidanandan, C., Ekker, S.C., Klee, E.W., Scaria, V., Sivasubbu, S. (2014) The Zebrafish GenomeWiki: a crowdsourcing approach to connect the long tail for zebrafish gene annotation. Database : the journal of biological databases and curation. 2014:bau011
Cao, Y., Hoeppner, L., Bach, S., E, G., Guo, Y., Wang, E., Wu, J., Cowley, M.J., Chang, D.K., Waddell, N., Grimmond, S.M., Biankin, A.V., Daly, R.J., Zheng, X., and Mukhopadhyay, D. (2013) Neuropilin-2 promotes extravasation and metastasis by interacting with endothelial alpha5 integrin. Cancer research. 73(14):4579-4590
Soni, K., Choudhary, A., Patowary, A., Singh, A.R., Bhatia, S., Sivasubbu, S., Chandrasekaran, S., and Pillai, B. (2013) miR-34 is maternally inherited in Drosophila melanogaster and Danio rerio. Nucleic acids research. 41(8):4470-80
Patowary, A., Purkanti, R., Singh, M., Chauhan, R., Singh, A.R., Swarnkar, M., Singh, N., Pandey, V., Torroja, C., Clark, M.D., Kocher, J.P., Clark, K.J., Stemple, D.L., Klee, E.W., Ekker, S.C., Scaria, V., and Sivasubbu, S. (2013) A sequence-based variation map of zebrafish. Zebrafish. 10(1):15-20
Hoeppner, L.H., Phoenix, K.N., Clark, K.J., Bhattacharya, R., Gong, X., Sciuto, T.E., Vohra, P., Suresh, S., Bhattacharya, S., Dvorak, A.M., Ekker, S.C., Dvorak, H.F., Claffey, K.P., and Mukhopadhyay, D. (2012) Revealing the role of phospholipase Cβ3 in the regulation of VEGF-induced vascular permeability. Blood. 120(11):2167-2173
Ponnudurai, R.P., Basak, T., Ahmad, S., Bhardwaj, G., Chauhan, R.K., Singh, R.A., Lalwani, M.K., Sivasubbu, S., and Sengupta, S. (2012) Proteomic analysis of zebrafish (Danio rerio) embryos exposed to cyclosporine A. Journal of proteomics. 75(3):1004-17
Lalwani, M.K., Sharma, M., Singh, A.R., Chauhan, R.K., Patowary, A., Singh, N., Scaria, V., and Sivasubbu, S. (2012) Reverse Genetics Screen in Zebrafish Identifies a Role of miR-142a-3p in Vascular Development and Integrity. PLoS One. 7(12):e52588
Bhartiya, D., Maini, J., Sharma, M., Joshi, P., Laddha, S.V., Jalali, S., Patowary, A., Purkanti, R., Lalwani, M., Singh, A.R., Chauhan, R., Singh, N., Bhardwaj, A., Scaria, V., and Sivasubbu, S. (2010) FishMap Zv8 update--a genomic regulatory map of zebrafish. Zebrafish. 7(2):179-180
Meli, R., Prasad, A., Patowary, A., Lalwani, M.K., Maini, J., Sharma, M., Singh, A.R., Kumar, G., Jadhav, V., Scaria, V., and Sivasubbu, S. (2008) FishMap: a community resource for zebrafish genomics. Zebrafish. 5(2):125-130