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ZFIN ID: ZDB-LAB-050228-1
Guillemin Lab
PI/Director: Guillemin, Karen
Contact Person: Guillemin, Karen
Address: Institute of Molecular Biology 1229 University of Oregon Eugene, OR 97403-1229 USA
Country: United States
Phone: (541) 346-5999
Fax: (541) 346-5891
Line Designation: b

Show all 4 genomic features


Cheesman, Sarah Post-Doc Milligan-Myhre, Kathy Post-Doc Bates, Jennifer M. Graduate Student
Mittge, Erika K. Research Staff Neal, J. T.

Postlethwait, J.H., Massaquoi, M.S., Farnsworth, D.R., Yan, Y.L., Guillemin, K., Miller, A.C. (2021) The SARS-CoV-2 receptor and other key components of the Renin-Angiotensin-Aldosterone System related to COVID-19 are expressed in enterocytes in larval zebrafish. Biology Open. 10(3):
Loes, A.N., Hinman, M.N., Farnsworth, D.R., Miller, A.C., Guillemin, K., Harms, M.J. (2021) Identification and Characterization of Zebrafish Tlr4 Coreceptor Md-2. Journal of immunology (Baltimore, Md. : 1950). 206(5):1046-1057
Solis, C.J., Hamilton, M.K., Caruffo, M., Garcia-Lopez, J.P., Navarrete, P., Guillemin, K., Feijoo, C.G. (2020) Intestinal Inflammation Induced by Soybean Meal Ingestion Increases Intestinal Permeability and Neutrophil Turnover Independently of Microbiota in Zebrafish. Frontiers in immunology. 11:1330
Stagaman, K., Sharpton, T.J., Guillemin, K. (2020) Zebrafish microbiome studies make waves. Lab animal. 49(7):201-207
Wiles, T.J., Schlomann, B.H., Wall, E.S., Betancourt, R., Parthasarathy, R., Guillemin, K. (2020) Swimming motility of a gut bacterial symbiont promotes resistance to intestinal expulsion and enhances inflammation. PLoS Biology. 18:e3000661
Schlomann, B.H., Wiles, T.J., Wall, E.S., Guillemin, K., Parthasarathy, R. (2019) Sublethal antibiotics collapse gut bacterial populations by enhancing aggregation and expulsion. Proceedings of the National Academy of Sciences of the United States of America. 116(43):21392-21400
Chia, J.S.M., Wall, E.S., Wee, C.L., Rowland, T.A.J., Cheng, R.K., Cheow, K., Guillemin, K., Jesuthasan, S. (2019) Bacteria evoke alarm behaviour in zebrafish. Nature communications. 10:3831
Wiles, T.J., Guillemin, K. (2019) The Other Side of the Coin: What Beneficial Microbes Can Teach us about Pathogenic Potential. Journal of molecular biology. 431(16):2946-2956
Robinson, C.D., Klein, H.S., Murphy, K.D., Parthasarathy, R., Guillemin, K., Bohannan, B.J.M. (2018) Experimental bacterial adaptation to the zebrafish gut reveals a primary role for immigration. PLoS Biology. 16:e2006893
Rolig, A.S., Sweeney, E.G., Kaye, L.E., DeSantis, M.D., Perkins, A., Banse, A.V., Hamilton, M.K., Guillemin, K. (2018) A bacterial immunomodulatory protein with lipocalin-like domains facilitates host-bacteria mutualism in larval zebrafish. eLIFE. 7:
Schlomann, B.H., Wiles, T.J., Wall, E.S., Guillemin, K., Parthasarathy, R. (2018) Bacterial Cohesion Predicts Spatial Distribution in the Larval Zebrafish Intestine. Biophysical journal. 115(11):2271-2277
Wiles, T.J., Wall, E.S., Schlomann, B.H., Hay, E.A., Parthasarathy, R., Guillemin, K. (2018) Modernized Tools for Streamlined Genetic Manipulation and Comparative Study of Wild and Diverse Proteobacterial Lineages. mBio. 9(5)
Troll, J.V., Hamilton, M.K., Abel, M.L., Ganz, J., Bates, J.M., Stephens, W.Z., Melancon, E., van der Vaart, M., Meijer, A.H., Distel, M., Eisen, J.S., Guillemin, K. (2018) Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling. Development (Cambridge, England). 145(4)
Burns, A.R., Miller, E., Agarwal, M., Rolig, A.S., Milligan-Myhre, K., Seredick, S., Guillemin, K., Bohannan, B.J.M. (2017) Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model. Proceedings of the National Academy of Sciences of the United States of America. 114(42):11181-11186
Burns, A.R., Watral, V., Sichel, S., Spagnoli, S., Banse, A.V., Mittge, E., Sharpton, T.J., Guillemin, K., Kent, M.L. (2017) Transmission of a common intestinal neoplasm in zebrafish by cohabitation. Journal of fish diseases. 41(4):569-579
Stagaman, K., Burns, A.R., Guillemin, K., Bohannan, B.J. (2017) The role of adaptive immunity as an ecological filter on the gut microbiota in zebrafish. The ISME Journal. 11:1630-1639
Burns, A.R., Guillemin, K. (2017) The scales of the zebrafish: host-microbiota interactions from proteins to populations. Current opinion in microbiology. 38:137-141
Rolig, A.S., Mittge, E.K., Ganz, J., Troll, J.V., Melancon, E., Wiles, T.J., Alligood, K., Stephens, W.Z., Eisen, J.S., Guillemin, K. (2017) The enteric nervous system promotes intestinal health by constraining microbiota composition. PLoS Biology. 15:e2000689
Melancon, E., Gomez De La Torre Canny, S., Sichel, S., Kelly, M., Wiles, T.J., Rawls, J.F., Eisen, J.S., Guillemin, K. (2017) Best practices for germ-free derivation and gnotobiotic zebrafish husbandry. Methods in cell biology. 138:61-100
Hill, J.H., Franzosa, E.A., Huttenhower, C., Guillemin, K. (2016) A conserved bacterial protein induces pancreatic beta cell expansion during zebrafish development. eLIFE. 5
Wiles, T.J., Jemielita, M., Baker, R.P., Schlomann, B.H., Logan, S.L., Ganz, J., Melancon, E., Eisen, J.S., Guillemin, K., Parthasarathy, R. (2016) Host Gut Motility Promotes Competitive Exclusion within a Model Intestinal Microbiota. PLoS Biology. 14:e1002517
Mason, T., Snell, K., Mittge, E., Melancon, E., Montgomery, R., McFadden, M., Camoriano, J., Kent, M.L., Whipps, C.M., Peirce, J. (2016) Strategies to Mitigate a Mycobacterium marinum Outbreak in a Zebrafish Research Facility. Zebrafish. 13 Suppl 1:S77-87
Burns, A.R., Zac Stephens, W., Stagaman, K., Wong, S., Rawls, J.F., Guillemin, K., Bohannan, B.J. (2016) Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development. The ISME Journal. 10(3):655-64
Zac Stephens, W., Burns, A.R., Stagaman, K., Wong, S., Rawls, J.F., Guillemin, K., Bohannan, B.J. (2016) The composition of the zebrafish intestinal microbial community varies across development. The ISME Journal. 10(3):644-54
Rolig, A.S., Parthasarathy, R., Burns, A.R., Bohannan, B.J., Guillemin, K. (2015) Individual Members of the Microbiota Disproportionately Modulate Host Innate Immune Responses. Cell Host & Microbe. 18:613-20
Stephens, W.Z., Wiles, T.J., Martinez, E.S., Jemielita, M., Burns, A.R., Parthasarathy, R., Bohannan, B.J., Guillemin, K. (2015) Identification of Population Bottlenecks and Colonization Factors during Assembly of Bacterial Communities within the Zebrafish Intestine. mBio. 6(6):e01163-15
Wong, S., Stephens, W.Z., Burns, A.R., Stagaman, K., David, L.A., Bohannan, B.J., Guillemin, K., Rawls, J.F. (2015) Ontogenetic Differences in Dietary Fat Influence Microbiota Assembly in the Zebrafish Gut. mBio. 6(5):e00687-15
Yang, Y., Millán, J.L., Mecsas, J., Guillemin, K. (2015) Intestinal alkaline phosphatase deficiency leads to lipopolysaccharide desensitization and faster weight gain. Infection and Immunity. 83(1):247-58
Jemielita, M., Taormina, M.J., Burns, A.R., Hampton, J.S., Rolig, A.S., Guillemin, K., Parthasarathy, R. (2014) Spatial and Temporal Features of the Growth of a Bacterial Species Colonizing the Zebrafish Gut. mBio. 5(6):1698-710
Paquette, C.E., Kent, M.L., Buchner, C., Tanguay, R.L., Guillemin, K., Mason, T.J., and Peterson, T.S. (2013) A Retrospective Study of the Prevalence and Classification of Intestinal Neoplasia in Zebrafish (Danio rerio). Zebrafish. 10(2):228-36
Neal, J.T., Peterson, T.S., Kent, M.L., and Guillemin, K. (2013) H. pylori Virulence Factor CagA Increases Intestinal Cell Proliferation by Wnt Pathway Activation in a Transgenic Zebrafish Model. Disease models & mechanisms. 6(3):802-10
Yang, Y., Wandler, A.M., Postlethwait, J.H., and Guillemin, K. (2012) Dynamic Evolution of the LPS-Detoxifying Enzyme Intestinal Alkaline Phosphatase in Zebrafish and Other Vertebrates. Frontiers in Molecular Innate Immunity. 3:314
Taormina, M.J., Jemielita, M., Stephens, W.Z., Burns, A.R., Troll, J.V., Parthasarathy, R., and Guillemin, K. (2012) Investigating bacterial-animal symbioses with light sheet microscopy. The Biological bulletin. 223(1):7-20
Roeselers, G., Mittge, E.K., Stephens, W.Z., Parichy, D.M., Cavanaugh, C.M., Guillemin, K., and Rawls, J.F. (2011) Evidence for a core gut microbiota in the zebrafish. The ISME Journal. 5(10):1595-608
Cheesman, S.E., Neal, J.T., Mittge, E., Seredick, B.M., and Guillemin, K. (2011) Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88. Proceedings of the National Academy of Sciences of the United States of America. 108(Suppl 1):4570-4577
Milligan-Myhre, K., Charette, J.R., Phennicie, R.T., Stephens, W.Z., Rawls, J.F., Guillemin, K., and Kim, C.H. (2011) Study of host-microbe interactions in zebrafish. Methods in cell biology. 105:87-116
Bates, J.M., Akerlund, J., Mittge, E., and Guillemin, K. (2007) Intestinal alkaline phosphatase detoxifies lipopolysaccharide and prevents inflammation in zebrafish in response to the gut microbiota. Cell Host & Microbe. 2(6):371-382
Baden, K.N., Murray, J., Capaldi, R.A., and Guillemin, K. (2007) Early developmental pathology due to cytochrome c oxidase deficiency is revealed by a new zebrafish model. The Journal of biological chemistry. 282(48):34839-34849
Hutchinson, S.A., Cheesman, S.E., Hale, L.A., Boone, J.Q., and Eisen, J.S. (2007) Nkx6 proteins specify one zebrafish primary motoneuron subtype by regulating late islet1 expression. Development (Cambridge, England). 134(9):1671-1677
Bates, J.M. (2007) Molecular dialogues between the gut and its resident microbiota affect the development of the zebrafish intestine. Ph.D. Thesis. :82p
Cheesman, S.E., and Guillemin, K. (2007) We know you are in there: Conversing with the indigenous gut microbiota. Research in Microbiology. 158(1):2-9
Bates, J.M., Mittge, E., Kuhlman, J., Baden, K.N., Cheesman, S.E., and Guillemin, K. (2006) Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation. Developmental Biology. 297(2):374-386
Cheesman, S.E., and Eisen, J.S. (2004) gsh1 demarcates hypothalamus and intermediate spinal cord in zebrafish. Gene expression patterns : GEP. 5(1):107-112
Cheesman, S.E., Layden, M.J., Von Ohlen, T., Doe, C.Q., and Eisen, J.S. (2004) Zebrafish and fly Nkx6 proteins have similar CNS expression patterns and regulate motoneuron formation. Development (Cambridge, England). 131(21):5221-5232