Fig. 2.

Fig. 2.

Example of Alliance JBrowse. The top is the standard control bar. Next are curated variants, often with known phenotypic consequences. The gene structure models (introns and exons) for each gene are shown, with the high throughput variants shown in the next track. The reference sequence in all reading frames is followed by a conservation track from University of California, Santa Cruz. Two alleles are highlighted in this figure: the blue box shows the e1417 allele to be in a conserved intron region, while the gold box shows the n378 allele to be in a coding exon.