ZFIN is now using GRCz12tu for Genomic Data
Gene
ube2kb
- ID
- ZDB-GENE-980605-9
- Name
- ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast)
- Symbol
- ube2kb Nomenclature History
- Previous Names
-
- ube2k
- hip2 (1)
- zgc:103472
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in protein polyubiquitination. Is expressed in lens. Orthologous to human UBE2K (ubiquitin conjugating enzyme E2 K).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:6892623 (2 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Active_site | IPR023313 | Ubiquitin-conjugating enzyme, active site |
| Domain | IPR000608 | Ubiquitin-conjugating (UBC), catalytic core domain |
| Domain | IPR015940 | Ubiquitin-associated domain |
| Domain | IPR042599 | Vertebrate ubiquitin-conjugating enzyme E2 K, UBA domain |
| Homologous_superfamily | IPR009060 | UBA-like superfamily |
| Homologous_superfamily | IPR016135 | Ubiquitin-conjugating enzyme/RWD-like |
Domain Details Per Protein
| Protein | Additional Resources | Length | UBA-like superfamily | Ubiquitin-associated domain | Ubiquitin-conjugating enzyme, active site | Ubiquitin-conjugating enzyme/RWD-like | Ubiquitin-conjugating (UBC), catalytic core domain | Vertebrate ubiquitin-conjugating enzyme E2 K, UBA domain |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q5PR60 | InterPro | 200 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ube2kb-201
(1)
|
Ensembl | 1,777 nt | ||
| mRNA |
ube2kb-202
(1)
|
Ensembl | 2,673 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers