ZFIN is now using GRCz12tu for Genomic Data
Gene
cst7
- ID
- ZDB-GENE-230322-3
- Name
- cystatin f
- Symbol
- cst7 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Ambiguous Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cysteine-type endopeptidase inhibitor activity. Predicted to act upstream of or within immune response.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| ue110 | Allele with one deletion | Unknown | Unknown | CRISPR |
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| Targeting Reagent | Created Alleles | Citations |
|---|---|---|
| CRISPR1-cst7 | Keatinge et al., 2021 | |
| CRISPR2-cst7 | Keatinge et al., 2021 | |
| CRISPR3-cst7 | Keatinge et al., 2021 |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Cystatin domain | Cystatin-F | Cystatin superfamily |
|---|---|---|---|---|---|
| UniProtKB:A0A8M1RM75 | InterPro | 148 |
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- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
No data available
No data available
- Genome Browsers
| Type | Accession # | Genome Assembly | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_073920580 (1) | GRCz12tu | 648 nt | |
| Genomic | GenBank:JBMGRA010000013 (1) | |||
| Polypeptide | UniProtKB:A0A8M1RM75 (1) | 148 aa |