ZFIN is now using GRCz12tu for Genomic Data
Gene
adamtsl5
- ID
- ZDB-GENE-161017-76
- Name
- ADAMTS like 5
- Symbol
- adamtsl5 Nomenclature History
- Previous Names
-
- si:dkey-25j19.6
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to act upstream of or within extracellular matrix organization. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix. Orthologous to human ADAMTSL5 (ADAMTS like 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001134 | Netrin domain |
| Domain | IPR010294 | ADAMTS/ADAMTS-like, Spacer 1 |
| Domain | IPR018933 | Netrin module, non-TIMP type |
| Domain | IPR045371 | ADAMTS/ADAMTS-like, cysteine-rich domain 3 |
| Family | IPR013273 | ADAMTS/ADAMTS-like |
| Family | IPR050439 | ADAMTS and ADAMTS-like |
| Homologous_superfamily | IPR008993 | Tissue inhibitor of metalloproteinases-like, OB-fold |
| Repeat | IPR000884 | Thrombospondin type-1 (TSP1) repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | ADAMTS/ADAMTS-like | ADAMTS/ADAMTS-like, cysteine-rich domain 3 | ADAMTS/ADAMTS-like, Spacer 1 | ADAMTS and ADAMTS-like | Netrin domain | Netrin module, non-TIMP type | Thrombospondin type-1 (TSP1) repeat | Tissue inhibitor of metalloproteinases-like, OB-fold |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7F4N4 | InterPro | 538 | ||||||||
| UniProtKB:A0A8M9Q8V9 | InterPro | 358 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
adamtsl5-201
(1)
|
Ensembl | 3,900 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers