Gene

rbpms

ID

ZDB-GENE-161017-145

Name

RNA binding protein, mRNA processing factor

Symbol

rbpms Nomenclature History

Previous Names

si:cabz01079824.1 (1)

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to have RNA binding activity. Involved in erythrocyte differentiation. Orthologous to human RBPMS (RNA binding protein, mRNA processing factor).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Kaufman et al., 2018

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from van Rooij et al., 2017
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rbpms Human Ortholog

No data available

Associated With rbpms Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	RNA recognition motif domain
UniProtKB:E7F9Q3 InterPro
UniProtKB:A0A8M9QDA5 InterPro	207
UniProtKB:A0A8M1RF35 InterPro	183
UniProtKB:A0A8M2BJP9 InterPro	162

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rbpms-201 (1) Ensembl	Havana	652 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations