Gene
trarg1a
- ID
- ZDB-GENE-131121-306
- Name
- trafficking regulator of GLUT4 (SLC2A4) 1a (gene/pseudogene)
- Symbol
- trarg1a Nomenclature History
- Previous Names
-
- si:dkey-151p21.9 (1)
- tusc5
- tusc5a
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Acts upstream of or within axon extension. Predicted to be active in membrane. Is expressed in Rohon-Beard neurons; hindbrain; and trigeminal sensory neurons. Orthologous to human TRARG1 (trafficking regulator of GLUT4 (SLC2A4) 1 (gene/pseudogene)).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Aoki et al., 2014
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Aoki et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CD225/Dispanin domain-containing protein | CD225/Dispanin family |
|---|---|---|---|---|
| UniProtKB:A0A8M2B4G6 | InterPro | 177 |
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| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trarg1a-201
(1)
|
Ensembl | 2,704 nt |
1 - 1 of 1
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-27L16 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-151P21 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-230A20 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_005157620 (1) | |||
| Genomic | GenBank:BX005404 (1) | 229643 nt | ||
| Polypeptide | UniProtKB:A0A8M2B4G6 (1) | 177 aa |
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Aoki, M., Segawa, H., Naito, M., and Okamoto, H. (2014) Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons. Biochemical and Biophysical Research Communications. 445(2):357-362
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