ZFIN is now using GRCz12tu for Genomic Data
Gene
rb1cc1
- ID
- ZDB-GENE-130206-1
- Name
- RB1-inducible coiled-coil 1
- Symbol
- rb1cc1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable molecular adaptor activity and protein kinase binding activity. Acts upstream of or within autophagy. Predicted to be part of Atg1/ULK1 kinase complex. Predicted to be active in phagophore assembly site membrane. Human ortholog(s) of this gene implicated in breast cancer. Orthologous to human RB1CC1 (RB1 inducible coiled-coil 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Kaizuka et al., 2016
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| breast cancer | Alliance | Breast cancer, somatic | 114480 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Autophagy protein ATG17-like domain | Autophagy-related protein 11 | Autophagy-related protein 11, C-terminal |
|---|---|---|---|---|---|
| UniProtKB:E7FFM2 | InterPro |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rb1cc1-201
(1)
|
Ensembl | 4,869 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance