Gene
snx29
- ID
- ZDB-GENE-121105-13
- Name
- sorting nexin 29
- Symbol
- snx29 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to enable phosphatidylinositol binding activity. Is expressed in brain; gut; and liver. Orthologous to human SNX29 (sorting nexin 29).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Xu et al., 2012
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Allele | Type | Localization | Consequence | Mutagen | Supplier |
---|---|---|---|---|---|
sa9437 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa12737 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa15604 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa22080 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
sa35267 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa35268 | Allele with one point mutation | Unknown | Splice Site | ENU | |
sa38885 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Phox homology | PX domain superfamily | RUN domain | RUN domain superfamily | SNX29, PX domain | Sorting nexin-29, RUN domain |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A8M9Q9D9 | InterPro | 638 | ||||||
UniProtKB:E7EYK3 | InterPro | 823 | ||||||
UniProtKB:A0A8M9Q3W8 | InterPro | 238 | ||||||
UniProtKB:A0AB32TND5 | InterPro | 556 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH211-61B7 | ZFIN Curated Data | |
Contained in | BAC | CH211-158N13 | ||
Contained in | BAC | DKEY-16I5 | ZFIN Curated Data | |
Contained in | BAC | DKEY-184O15 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:XM_688793 (1) | 3805 nt | ||
Genomic | RefSeq:NW_018394836 (1) | 432949 nt | ||
Polypeptide | UniProtKB:E7EYK3 (1) | 823 aa |
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Xu, L., Yin, W., Xia, J., Peng, M., Li, S., Lin, S., Pei, A., and Shum, X. (2012) An anti-apoptotic role of SNX7 is required for liver development in zebrafish. Hepatology (Baltimore, Md.). 55(6):1985-1993
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