Gene
itfg1
- ID
- ZDB-GENE-121003-3
- Name
- integrin alpha FG-GAP repeat containing 1
- Symbol
- itfg1 Nomenclature History
- Previous Names
-
- im:7137443
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human ITFG1 (integrin alpha FG-GAP repeat containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7137443 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | FG-GAP repeat | Integrin alpha, N-terminal | T-cell immunomodulatory protein |
---|---|---|---|---|---|
UniProtKB:A0A8M9PZA4 | InterPro | 599 | |||
UniProtKB:E7F1C8 | InterPro | 599 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH73-212P10 | ZFIN Curated Data | |
Contained in | BAC | DKEY-11G15 | ZFIN Curated Data | |
Contained in | BAC | DKEY-96K10 | ||
Encodes | EST | IMAGE:7137443 | Thisse et al., 2004 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:XM_021472011 (1) | 3187 nt | ||
Genomic | GenBank:BX072581 (1) | 239497 nt | ||
Polypeptide | UniProtKB:A0A8M9PZA4 (1) | 599 aa |
- Comparative Orthology
- Alliance
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Yang, D., Liu, Q., Yang, M., Wu, H., Wang, Q., Xiao, J., and Zhang, Y. (2012) RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish. BMC Genomics. 13(1):319
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