Gene

itfg1

ID
ZDB-GENE-121003-3
Name
integrin alpha FG-GAP repeat containing 1
Symbol
itfg1 Nomenclature History
Previous Names
  • im:7137443
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human ITFG1 (integrin alpha FG-GAP repeat containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa11345Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa14164Allele with one point mutationUnknownSplice SiteENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
sa14935Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With itfg1 Human Ortholog
No data available
Associated With itfg1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR024881 T-cell immunomodulatory protein
Homologous_superfamily IPR028994 Integrin alpha, N-terminal
Repeat IPR013517 FG-GAP repeat
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Domain Details Per Protein
Protein Additional Resources Length FG-GAP repeat Integrin alpha, N-terminal T-cell immunomodulatory protein
UniProtKB:A0A8M9PZA4 InterPro 599
UniProtKB:E7F1C8 InterPro 599
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 7
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA itfg1-201 (1)
Ensembl
Ensembl 4,855 nt
ZFIN BLAST
mRNA itfg1-202 (1)
Ensembl
Ensembl 1,260 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-212P10ZFIN Curated Data
Contained inBACDKEY-11G15ZFIN Curated Data
Contained inBACDKEY-96K10
EncodesESTIMAGE:7137443Thisse et al., 2004
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_021472011 (1)3187 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX072581 (1)239497 nt
MegaBLAST
PolypeptideUniProtKB:A0A8M9PZA4 (1)599 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Species Symbol Chromosome Accession # Evidence
HumanITFG116
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
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