Gene
pcif1
- ID
- ZDB-GENE-120920-2
- Name
- phosphorylated CTD interacting factor 1
- Symbol
- pcif1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Enables S-adenosyl-L-methionine binding activity and mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity. Involved in mRNA processing. Predicted to be active in nucleus. Orthologous to human PCIF1 (phosphorylated CTD interacting factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001202 | WW domain |
Domain | IPR022035 | PCIF1, WW domain |
Family | IPR039881 | mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-like |
Homologous_superfamily | IPR029048 | Heat shock protein 70kD, C-terminal domain superfamily |
Homologous_superfamily | IPR036020 | WW domain superfamily |
1 - 5 of 5
Domain Details Per Protein
Protein | Additional Resources | Length | Heat shock protein 70kD, C-terminal domain superfamily | mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-like | PCIF1, WW domain | WW domain | WW domain superfamily |
---|---|---|---|---|---|---|---|
UniProtKB:A0AB13AB81 | InterPro | 721 | |||||
UniProtKB:A0A0R4IKJ1 | InterPro PDB | 721 |
1 - 2 of 2
Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | Fosmid | CH1073-250A3 | ZFIN Curated Data |
1 - 1 of 1
Show
Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001423772 (1) | 2670 nt | ||
Genomic | GenBank:CU638700 (1) | 37764 nt | ||
Polypeptide | UniProtKB:A0A0R4IKJ1 (1) | 721 aa |