Gene

bsnb

ID

ZDB-GENE-120628-1

Name

bassoon (presynaptic cytomatrix protein) b

Symbol

bsnb Nomenclature History

Previous Names

zmp:0000001201

Type

protein_coding_gene

Location

Chr: 11 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity. Predicted to be involved in synapse assembly. Predicted to localize to presynaptic active zone. Is expressed in brain and forebrain.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With bsnb Human Ortholog

No data available

Associated With bsnb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR008899	Zinc finger, piccolo-type
Homologous_superfamily	IPR011011	Zinc finger, FYVE/PHD-type
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type

Domain Details Per Protein

Protein	Length	Zinc finger, FYVE/PHD-type	Zinc finger, piccolo-type	Zinc finger, RING/FYVE/PHD-type
UniProtKB:A0A8M2B2S6 InterPro	3739
UniProtKB:F1QTK1 InterPro	3305

Transcripts

Genome Browsers

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	bsnb-201 (1) Ensembl	Havana	11090 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	bsnb-203 (1) Ensembl	Havana	619 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations