Gene
poldip3
- ID
- ZDB-GENE-120201-2
- Name
- polymerase (DNA-directed), delta interacting protein 3
- Symbol
- poldip3 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Predicted to enable mRNA binding activity. Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to act upstream of or within mRNA transport. Predicted to be active in nuclear speck. Orthologous to human POLDIP3 (DNA polymerase delta interacting protein 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa39969 | Allele with one point mutation | Unknown | Premature Stop | ENU |
1 - 1 of 1
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR034784 | PDIP3, RNA recognition motif |
| Family | IPR051229 | ALYREF mRNA export adapter |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
1 - 5 of 5
Domain Details Per Protein
| Protein | Additional Resources | Length | ALYREF mRNA export adapter | Nucleotide-binding alpha-beta plait domain superfamily | PDIP3, RNA recognition motif | RNA-binding domain superfamily | RNA recognition motif domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3B816 | InterPro | 519 | |||||
| UniProtKB:A0A8M3AQ58 | InterPro | 520 | |||||
| UniProtKB:A0AB32TLZ9 | InterPro | 489 |
1 - 3 of 3
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
poldip3-201
(1)
|
Ensembl | 1,470 nt | ||
| mRNA |
poldip3-202
(1)
|
Ensembl | 1,407 nt | ||
| mRNA |
poldip3-203
(1)
|
Ensembl | 1,393 nt |
1 - 3 of 3
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH73-211L13 | ZFIN Curated Data | |
| Contained in | Fosmid | CH1073-314I13 | ZFIN Curated Data |
1 - 2 of 2
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_068218387 (1) | 1814 nt | ||
| Genomic | GenBank:CU672266 (1) | 104622 nt | ||
| Polypeptide | UniProtKB:A0A8M3AQ58 (1) | 520 aa |
No data available