Gene
trim46a
- ID
- ZDB-GENE-110825-1
- Name
- tripartite motif containing 46a
- Symbol
- trim46a Nomenclature History
- Previous Names
-
- zmp:0000000540
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to be involved in anterograde synaptic vesicle transport; generation of neurons; and microtubule bundle formation. Predicted to be located in cytoplasm. Predicted to be active in main axon. Is expressed in blastomere; central nervous system; eye; and internal yolk syncytial layer. Orthologous to human TRIM46 (tripartite motif containing 46).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Jung et al., 2021
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR000315 | B-box-type zinc finger |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR017903 | COS domain |
| Domain | IPR018957 | Zinc finger, C3HC4 RING-type |
| Family | IPR050617 | E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
| Homologous_superfamily | IPR043136 | B30.2/SPRY domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | B30.2/SPRY domain superfamily | B-box-type zinc finger | Concanavalin A-like lectin/glucanase domain superfamily | COS domain | E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins | Fibronectin type III | Fibronectin type III superfamily | Immunoglobulin-like fold | Zinc finger, C3HC4 RING-type | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7F8R6 | InterPro | 773 | ||||||||||||
| UniProtKB:A0A8M2B4G5 | InterPro | 569 | ||||||||||||
| UniProtKB:A0A8M2B520 | InterPro | 546 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trim46a-201
(1)
|
Ensembl | 2,559 nt | ||
| mRNA |
trim46a-202
(1)
|
Ensembl | 2,256 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance