Gene
susd4
- ID
- ZDB-GENE-110511-1
- Name
- sushi domain containing 4
- Symbol
- susd4 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Acts upstream of or within chordate embryonic development. Predicted to be located in membrane. Orthologous to human SUSD4 (sushi domain containing 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Tu et al., 2010
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Targeting Reagent | Created Alleles | Citations |
---|---|---|
CRISPR1-susd4 | Varshney et al., 2015 | |
CRISPR2-susd4 | Varshney et al., 2015 | |
MO1-susd4 | N/A | Tu et al., 2010 |
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Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Sushi domain-containing protein 4 | Sushi/SCR/CCP domain | Sushi/SCR/CCP superfamily |
---|---|---|---|---|---|
UniProtKB:E7FEC4 | InterPro | 484 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH211-202F3 |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_001319133 (1) | 1839 nt | ||
Genomic | GenBank:BX088653 (2) | 223839 nt | ||
Polypeptide | UniProtKB:E7FEC4 (1) | 484 aa |
- Comparative Orthology
- Alliance
- Wen, Z.Y., Wang, J., Bian, C., Zhang, X., Li, J., Peng, Y., Zhan, Q., Shi, Q., Li, Y.Y. (2019) Molecular cloning of two kcnk3 genes from the Northern snakehead (Channa argus) for quantification of their transcriptions in response to fasting and refeeding. General and comparative endocrinology. 281:49-57
- Elkon, R., Milon, B., Morrison, L., Shah, M., Vijayakumar, S., Racherla, M., Leitch, C.C., Silipino, L., Hadi, S., Weiss-Gayet, M., Barras, E., Schmid, C.D., Ait-Lounis, A., Barnes, A., Song, Y., Eisenman, D.J., Eliyahu, E., Frolenkov, G.I., Strome, S.E., Durand, B., Zaghloul, N.A., Jones, S.M., Reith, W., Hertzano, R. (2015) RFX transcription factors are essential for hearing in mice. Nature communications. 6:8549
- Tu, Z., Cohen, M., Bu, H., and Lin, F. (2010) Tissue Distribution and Functional Analysis of Sushi Domain-Containing Protein 4. The American journal of pathology. 176(5):2378-2384
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