ZFIN is now using GRCz12tu for Genomic Data
Gene
cdkn1d
- ID
- ZDB-GENE-110215-1
- Name
- cyclin-dependent kinase inhibitor 1D
- Symbol
- cdkn1d Nomenclature History
- Previous Names
-
- p20 (1)
- Type
- protein_coding_gene
- Location
- Ambiguous Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- No data available
- Genome Resources
-
- Alliance (1)
- Gene:100151464 (1)
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Stankiewicz et al., 2017
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa24805 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Cyclin-dependent kinase inhibitor 1 | Cyclin-dependent kinase inhibitor domain | Cyclin-dependent kinase inhibitor domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:A0A0R4IIK7 | InterPro | ||||
| UniProtKB:M9TJA4 | InterPro | 169 |
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- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
No data available
No data available
- Genome Browsers
| Type | Accession # | Genome Assembly | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001281477 (1) | 645 nt | ||
| Genomic | GenBank:JBMGRA010000004 (1) | |||
| Polypeptide | UniProtKB:M9TJA4 (1) | 169 aa |
- Comparative Orthology
- Alliance
No data available
- Jagtap, U., Sivadas, A., Basu, S., Verma, A., Sivasubbu, S., Scaria, V., Sachidanandan, C. (2019) A Temporal Map of Gene Expression Pattern During Zebrafish Liver Regeneration. Zebrafish. 17(1):1-10
- Jiang, J., Wu, S., Lv, L., Liu, X., Chen, L., Zhao, X., Wang, Q. (2019) Mitochondrial dysfunction, apoptosis and transcriptomic alterations induced by four strobilurins in zebrafish (Danio rerio) early life stages. Environmental pollution (Barking, Essex : 1987). 253:722-730
- Laranjeiro, R., Tamai, T.K., Letton, W., Hamilton, N., Whitmore, D. (2018) Circadian Clock Synchronization of the Cell Cycle in Zebrafish Occurs through a Gating Mechanism Rather Than a Period-phase Locking Process. Journal of biological rhythms. 33(2):137-150
- Akle, V., Stankiewicz, A.J., Kharchenko, V., Yu, L., Kharchenko, P.V., Zhdanova, I.V. (2017) Circadian Kinetics of Cell Cycle Progression in Adult Neurogenic Niches of a Diurnal Vertebrate. The Journal of neuroscience : the official journal of the Society for Neuroscience. 37(7):1900-1909
- Stankiewicz, A.J., McGowan, E.M., Yu, L., Zhdanova, I.V. (2017) Impaired Sleep, Circadian Rhythms and Neurogenesis in Diet-Induced Premature Aging. International Journal of Molecular Sciences. 18(11)
- Xiao, C., Gao, L., Hou, Y., Xu, C., Chang, N., Wang, F., Hu, K., He, A., Luo, Y., Wang, J., Peng, J., Tang, F., Zhu, X., Xiong, J.W. (2016) Chromatin-remodelling factor Brg1 regulates myocardial proliferation and regeneration in zebrafish. Nature communications. 7:13787
- Rakshambikai, R., Srinivasan, N., and Gadkari, R.A. (2014) Repertoire of protein kinases encoded in the genome of zebrafish shows remarkably large population of PIM kinases. Journal of Bioinformatics and Computational Biology. 12(1):1350014
- Laranjeiro, R., Tamai, T.K., Peyric, E., Krusche, P., Ott, S., and Whitmore, D. (2013) Cyclin-dependent kinase inhibitor p20 controls circadian cell-cycle timing. Proceedings of the National Academy of Sciences of the United States of America. 110(17):6835-40
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