ZFIN is now using GRCz12tu for Genomic Data
Gene
lhfpl5a
- ID
- ZDB-GENE-110131-8
- Name
- LHFPL tetraspan subfamily member 5a
- Symbol
- lhfpl5a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within detection of mechanical stimulus involved in sensory perception; inner ear receptor cell stereocilium organization; and protein localization to cilium. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in anterior macula; hair cell anterior macula; hair cell posterior macula; and posterior macula. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 67. Orthologous to human LHFPL5 (LHFPL tetraspan subfamily member 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Erickson et al., 2020
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| autosomal recessive nonsyndromic deafness 67 | Alliance | Deafness, autosomal recessive 67 | 610265 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR019372 | Lipoma HMGIC fusion partner-like protein |
Domain Details Per Protein
| Protein | Additional Resources | Length | Lipoma HMGIC fusion partner-like protein |
|---|---|---|---|
| UniProtKB:F1Q837 | InterPro | 219 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
lhfpl5a-201
(1)
|
Ensembl | 1,137 nt | ||
| mRNA |
lhfpl5a-202
(1)
|
Ensembl | 1,051 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers